Searching for up to 100 curated homologs for AZOBR_RS27935 FitnessBrowser__azobra:AZOBR_RS27935 (317 a.a.)
Found high-coverage hits (≥70%) to 32 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
RBSB_BACSU / P36949 Ribose import binding protein RbsB from Bacillus subtilis (strain 168) (see 2 papers)
29% identity, 75% coverage of query (108 bits)
2ioyA / Q8RD41 Crystal structure of thermoanaerobacter tengcongensis ribose binding protein (see paper)
31% identity, 75% coverage of query (100 bits)
2x7xA / Q8A6X1 Fructose binding periplasmic domain of hybrid two component system bt1754 (see paper)
32% identity, 78% coverage of query (97.4 bits)
HSERO_RS03635 D-mannose ABC transporter, substrate-binding component from Herbaspirillum seropedicae SmR1
31% identity, 83% coverage of query (94.4 bits)
PS417_11885 Inositol transport system sugar-binding protein from Pseudomonas simiae WCS417
28% identity, 95% coverage of query (89.4 bits)
7e7mC / Q8E283 Crystal structure analysis of the streptococcus agalactiae ribose binding protein rbsb
25% identity, 92% coverage of query (89.0 bits)
RbsB / b3751 ribose ABC transporter periplasmic binding protein from Escherichia coli K-12 substr. MG1655 (see 25 papers)
RbsB / P02925 ribose ABC transporter periplasmic binding protein from Escherichia coli (strain K12) (see 25 papers)
RBSB_ECOLI / P02925 Ribose import binding protein RbsB from Escherichia coli (strain K12) (see 5 papers)
TC 3.A.1.2.1 / P02925 RbsB aka RBSP aka PRLB aka B3751, component of Ribose porter from Escherichia coli (see 11 papers)
rbsB / GB|AAC76774.1 D-ribose-binding periplasmic protein; EC 3.6.3.17 from Escherichia coli K12 (see 11 papers)
27% identity, 80% coverage of query (85.9 bits)
TC 3.A.1.2.19 / Q9X053 Periplasmic binding protein/LacI transcriptional regulator, component of D-ribose porter (Nanavati et al., 2006). Induced by ribose from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
26% identity, 91% coverage of query (85.5 bits)
1dbpA / P02925 Identical mutations at corresponding positions in two homologous proteins with non-identical effects (see paper)
27% identity, 80% coverage of query (85.5 bits)
2fn8A / Q9X053 Thermotoga maritima ribose binding protein ribose bound form (see paper)
25% identity, 90% coverage of query (84.0 bits)
THPA_MYCS2 / A0QYB5 D-threitol-binding protein from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
29% identity, 77% coverage of query (82.0 bits)
4rsmA / A0QYB5 Crystal structure of carbohydrate transporter msmeg_3599 from mycobacterium smegmatis str. Mc2 155, target efi-510970, in complex with d-threitol (see paper)
29% identity, 77% coverage of query (81.3 bits)
RR42_RS03370 fructose ABC transporter, substrate-binding component (FrcB) from Cupriavidus basilensis FW507-4G11
29% identity, 80% coverage of query (78.6 bits)
APIBP_PARG4 / B1G898 D-apiose import binding protein; D-apiose binding SBP from Paraburkholderia graminis (strain ATCC 700544 / DSM 17151 / LMG 18924 / NCIMB 13744 / C4D1M) (see paper)
28% identity, 77% coverage of query (76.6 bits)
5dteB / A6VKG5 Crystal structure of an abc transporter periplasmic solute binding protein (ipr025997) from actinobacillus succinogenes 130z(asuc_0081, target efi-511065) with bound d-allose
26% identity, 74% coverage of query (75.9 bits)
HSERO_RS11480 D-ribose ABC transporter, substrate-binding component RbsB from Herbaspirillum seropedicae SmR1
22% identity, 91% coverage of query (72.0 bits)
4ry9A / A1WJM2 Crystal structure of carbohydrate transporter solute binding protein veis_2079 from verminephrobacter eiseniae ef01-2, target efi-511009, a complex with d-talitol
24% identity, 77% coverage of query (67.4 bits)
4yo7A / Q9KAG4 Crystal structure of an abc transporter solute binding protein (ipr025997) from bacillus halodurans c-125 (bh2323, target efi- 511484) with bound myo-inositol
24% identity, 91% coverage of query (67.4 bits)
4ry9B Crystal structure of carbohydrate transporter solute binding protein veis_2079 from verminephrobacter eiseniae ef01-2, target efi-511009, a complex with d-talitol
24% identity, 77% coverage of query (67.4 bits)
TC 3.A.1.2.16 / Q1M4Q9 Periplasmic erythritol binding protein, component of The erythritol uptake permease, EryEFG (Yost et al., 2006) (probably orthologous to 3.A.1.2.11) from Rhizobium leguminosarum bv. viciae (strain 3841) (see paper)
24% identity, 76% coverage of query (66.6 bits)
YtfQ / b4227 galactofuranose ABC transporter periplasmic binding protein (EC 7.5.2.9) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
YtfQ / P39325 galactofuranose ABC transporter periplasmic binding protein (EC 7.5.2.9) from Escherichia coli (strain K12) (see 3 papers)
YTFQ_ECOLI / P39325 Galactofuranose-binding protein YtfQ from Escherichia coli (strain K12) (see paper)
P39325 ABC-type D-galactofuranose transporter (EC 7.5.2.9) from Escherichia coli (see paper)
26% identity, 88% coverage of query (65.9 bits)
2vk2A / P39325 Crystal structure of a galactofuranose binding protein (see paper)
26% identity, 88% coverage of query (65.5 bits)
APIBP_ACTSZ / A6VKQ8 D-apiose import binding protein; D-apiose binding SBP from Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z) (see paper)
28% identity, 74% coverage of query (64.3 bits)
eryG / Q2YIY2 putative erythritol ABC transporter substrate-binding protein from Brucella abortus (strain 2308) (see 3 papers)
24% identity, 76% coverage of query (63.9 bits)
Shewana3_2073 L-arabinose ABC transporter, substrate-binding component AraU from Shewanella sp. ANA-3
27% identity, 75% coverage of query (61.6 bits)
TC 3.A.1.2.26 / A6LW10 D-xylose ABC transporter, periplasmic substrate-binding protein, component of Xylose transporter, XylFGH (XylF (R), 359 aas; XylG (C), 525 aas; XylH (M), 389 aas from Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052)
27% identity, 75% coverage of query (61.2 bits)
5ocpA / A0KWY4 The periplasmic binding protein component of the arabinose abc transporter from shewanella sp. Ana-3 bound to alpha and beta-l- arabinofuranose
27% identity, 75% coverage of query (60.8 bits)
4rxmA Crystal structure of periplasmic abc transporter solute binding protein a7jw62 from mannheimia haemolytica phl213, target efi-511105, in complex with myo-inositol
24% identity, 78% coverage of query (56.6 bits)
4rxmB Crystal structure of periplasmic abc transporter solute binding protein a7jw62 from mannheimia haemolytica phl213, target efi-511105, in complex with myo-inositol
24% identity, 78% coverage of query (56.6 bits)
4wutA / B9K0B2 Crystal structure of an abc transporter solute binding protein (ipr025997) from agrobacterium vitis (avi_5133, target efi-511220) with bound d-fucose
23% identity, 74% coverage of query (56.2 bits)
2h3hA / Q9WXW9 Crystal structure of the liganded form of thermotoga maritima glucose binding protein (see paper)
22% identity, 76% coverage of query (51.2 bits)
3c6qC Apo and ligand-bound form of a thermophilic glucose/xylose binding protein
22% identity, 75% coverage of query (50.8 bits)
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Lawrence Berkeley National Laboratory