Searching for up to 100 curated homologs for Ac3H11_1188 FitnessBrowser__acidovorax_3H11:Ac3H11_1188 (296 a.a.)
Found high-coverage hits (≥70%) to 14 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
pmdB / BAI50715.1 protocatechuate 4,5-dioxygenase beta subunit from Comamonas sp. E6 (see paper)
82% identity, 100% coverage of query (499 bits)
PmdB / Q8RNX9 protocatechuate 4,5-dioxygenase β subunit (EC 1.13.11.8; EC 1.13.11.57) from Comamonas testosteroni (see paper)
proOb / BAD04058.1 beta subunit of protocatechuate 4,5-dioxygenase from Pseudomonas straminea (see paper)
81% identity, 100% coverage of query (499 bits)
AAK73573.1 PmdB from Comamonas testosteroni (see paper)
81% identity, 100% coverage of query (498 bits)
G2IQQ3 protocatechuate 4,5-dioxygenase (subunit 1/2) (EC 1.13.11.8) from Sphingobium sp. (see paper)
60% identity, 99% coverage of query (374 bits)
ligB / P22636 protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8) from Sphingobium sp. (strain NBRC 103272 / SYK-6) (see 2 papers)
ligB / BAB88743.1 beta subunit of protocatechuate 4,5-dioxygenase from Sphingomonas paucimobilis (see 5 papers)
60% identity, 99% coverage of query (374 bits)
1b4uB / P22636 Protocatechuate 4,5-dioxygenase (ligab) in complex with protocatechuate (pca) (see paper)
60% identity, 99% coverage of query (371 bits)
desB / Q5NTE5 gallate dioxygenase monomer (EC 1.13.11.57) from Sphingomonas paucimobilis (see paper)
G2IKE5 gallate dioxygenase (EC 1.13.11.57) from Sphingobium sp. SYK-6 (see paper)
Q5NTE5 gallate dioxygenase (EC 1.13.11.57) from Sphingomonas paucimobilis (see paper)
desB / BAD80871.1 gallate dioxygenase from Sphingomonas paucimobilis (see 2 papers)
41% identity, 100% coverage of query (235 bits)
3wr9A / G2IKE5 Crystal structure of the anaerobic desb-gallate complex (see paper)
41% identity, 99% coverage of query (233 bits)
3wkuA Crystal structure of the anaerobic desb-gallate complex
40% identity, 99% coverage of query (227 bits)
gllA / Q88JX5 gallate dioxygenase monomer (EC 1.13.11.57) from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
GALA_PSEPK / Q88JX5 Gallate dioxygenase; Gallate degradation protein A; EC 1.13.11.57 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see 2 papers)
41% identity, 73% coverage of query (171 bits)
carBb / Q8GI18 2'-aminobiphenyl-2,3-diol 1,2-dioxygenase Bb subunit (EC 1.13.11.39) from Pseudomonas resinovorans (see 2 papers)
carBb / BAC41547.1 catalytic subunit of meta cleavage enzyme from Pseudomonas resinovorans (see 9 papers)
30% identity, 85% coverage of query (121 bits)
Build an alignment for Ac3H11_1188 and 11 homologs with ≥ 30% identity
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bphC6 / BAD10908.1 2, 3-dihydroxybiphenyl 1, 2-dioxygenase from Rhodococcus rhodochrous (see paper)
28% identity, 87% coverage of query (90.5 bits)
flnD1 / BAD51800.1 extradiol dioxygenase large subunit from Rhodococcus sp. DFA3 (see paper)
28% identity, 87% coverage of query (89.7 bits)
flnD1 / BAC75996.1 extradiol dioxygenase large subunit from Terrabacter sp. DBF63 (see paper)
30% identity, 72% coverage of query (86.3 bits)
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Lawrence Berkeley National Laboratory