Searching for up to 100 curated homologs for Ac3H11_2278 FitnessBrowser__acidovorax_3H11:Ac3H11_2278 (722 a.a.)
Found high-coverage hits (≥70%) to 35 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
Dsui_0519 Methylmalonyl-CoA mutase (EC 5.4.99.2) from Dechlorosoma suillum PS
82% identity, 96% coverage of query (1207 bits)
mcmA / Q3J4D7 methylmalonyl-CoA mutase (EC 5.4.99.2) from Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.) (see paper)
MCM_CERS4 / Q3J4D7 Methylmalonyl-CoA mutase; MCM; EC 5.4.99.2 from Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.) (Rhodobacter sphaeroides) (see 2 papers)
70% identity, 98% coverage of query (1036 bits)
MUT / P22033 Methylmalonyl-CoA mutase, mitochondrial (EC 5.4.99.2) from Homo sapiens (see 4 papers)
MUTA_HUMAN / P22033 Methylmalonyl-CoA mutase, mitochondrial; MCM; Methylmalonyl-CoA isomerase; EC 5.4.99.2 from Homo sapiens (Human) (see 31 papers)
P22033 methylmalonyl-CoA mutase (EC 5.4.99.2) from Homo sapiens (see 6 papers)
65% identity, 97% coverage of query (961 bits)
2xiqA / P22033 Crystal structure of human methylmalonyl-coa mutase in complex with adenosylcobalamin and malonyl-coa (see paper)
65% identity, 97% coverage of query (959 bits)
MUTA_MOUSE / P16332 Methylmalonyl-CoA mutase, mitochondrial; MCM; Methylmalonyl-CoA isomerase; EC 5.4.99.2 from Mus musculus (Mouse) (see paper)
65% identity, 97% coverage of query (959 bits)
8dyjB Crystal structure of human methylmalonyl-coa mutase in complex with adp and cob(ii)alamin
65% identity, 97% coverage of query (958 bits)
Caur_2508 / A9WI23 methylmalonyl-CoA mutase large subunit (EC 5.4.99.2) from Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) (see paper)
64% identity, 98% coverage of query (949 bits)
Q8MI68 methylmalonyl-CoA mutase (EC 5.4.99.2) from Sus scrofa (see paper)
64% identity, 97% coverage of query (947 bits)
MCM_RHIME / O86028 Methylmalonyl-CoA mutase; MCM; EC 5.4.99.2 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) (see 2 papers)
65% identity, 97% coverage of query (943 bits)
Q23381 methylmalonyl-CoA mutase (EC 5.4.99.2) from Caenorhabditis elegans (see paper)
63% identity, 99% coverage of query (940 bits)
mutB / AAA03041.1 methylmalonyl-CoA large subunit from Streptomyces cinnamonensis (see paper)
64% identity, 97% coverage of query (936 bits)
F1KUP0 methylmalonyl-CoA mutase subunit (EC 5.4.99.2) from Ascaris suum (see paper)
64% identity, 97% coverage of query (934 bits)
mcm / CAJ91090.1 methylmalonyl-CoA mutase from Sorangium cellulosum (see paper)
65% identity, 93% coverage of query (929 bits)
8gjuJ / P22033 Crystal structure of human methylmalonyl-coa mutase (mmut) in complex with methylmalonic acidemia type a protein (mmaa), coenzyme a, and gdp (see paper)
64% identity, 97% coverage of query (927 bits)
YliK / b2917 methylmalonyl-CoA mutase (EC 5.4.99.2) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
scpA / P27253 methylmalonyl-CoA mutase (EC 5.4.99.2) from Escherichia coli (strain K12) (see 4 papers)
SCPA_ECOLI / P27253 Methylmalonyl-CoA mutase; MCM; EC 5.4.99.2 from Escherichia coli (strain K12) (see 3 papers)
63% identity, 98% coverage of query (907 bits)
Q84FZ1 methylmalonyl-CoA mutase (EC 5.4.99.2) from Methylorubrum extorquens (see paper)
63% identity, 99% coverage of query (883 bits)
mutB / P11653 methylmalonyl-CoA mutase large subunit (EC 5.4.99.2) from Propionibacterium freudenreichii subsp. shermanii (see 8 papers)
MUTB_PROFR / P11653 Methylmalonyl-CoA mutase large subunit; MCM-alpha; EC 5.4.99.2 from Propionibacterium freudenreichii subsp. shermanii (see 4 papers)
P11653 methylmalonyl-CoA mutase (EC 5.4.99.2) from Propionibacterium freudenreichii subsp. shermanii (see paper)
61% identity, 95% coverage of query (872 bits)
7reqA Methylmalonyl-coa mutase, 2-carboxypropyl-coa inhibitor complex
61% identity, 95% coverage of query (872 bits)
3reqA Methylmalonyl-coa mutase, substrate-free state (poor quality structure)
61% identity, 95% coverage of query (872 bits)
2reqA Methylmalonyl-coa mutase, non-productive coa complex, in open conformation representing substrate-free state
61% identity, 95% coverage of query (872 bits)
4reqA Methylmalonyl-coa mutase substrate complex
61% identity, 95% coverage of query (871 bits)
6reqA Methylmalonyl-coa mutase, 3-carboxypropyl-coa inhibitor complex
61% identity, 95% coverage of query (871 bits)
5reqA Methylmalonyl-coa mutase, y89f mutant, substrate complex
61% identity, 95% coverage of query (870 bits)
1e1cA / P11653 Methylmalonyl-coa mutase h244a mutant (see paper)
61% identity, 95% coverage of query (867 bits)
6oxdA / P9WJK5 Structure of mycobacterium tuberculosis methylmalonyl-coa mutase with adenosyl cobalamin (see paper)
62% identity, 94% coverage of query (855 bits)
O74009 methylmalonyl-CoA mutase (subunit 2/2) (EC 5.4.99.2) from Pyrococcus horikoshii (see paper)
54% identity, 72% coverage of query (553 bits)
A4YEG1 methylmalonyl-CoA mutase (subunit 2/2) (EC 5.4.99.2) from Metallosphaera sedula (see paper)
47% identity, 72% coverage of query (463 bits)
4r3uA / I3VE77 Crystal structure of 2-hydroxyisobutyryl-coa mutase (see paper)
46% identity, 71% coverage of query (454 bits)
hcmA / I3VE77 2-hydroxyisobutanoyl-CoA mutase large subunit (EC 5.4.99.64) from Aquincola tertiaricarbonis (see 3 papers)
HCMA_AQUTE / I3VE77 2-hydroxyisobutanoyl-CoA mutase large subunit; 2-hydroxyisobutyryl-CoA mutase large subunit; HCM large subunit; EC 5.4.99.64 from Aquincola tertiaricarbonis (see 2 papers)
I3VE77 2-hydroxyisobutanoyl-CoA mutase (subunit 2/2) (EC 5.4.99.64) from Aquincola tertiaricarbonis (see 3 papers)
46% identity, 71% coverage of query (454 bits)
D5WTR7 2-hydroxyisobutanoyl-CoA mutase (subunit 2/2) (EC 5.4.99.64) from Kyrpidia tusciae DSM 2912 (see paper)
40% identity, 74% coverage of query (387 bits)
C7C6S9 ethylmalonyl-CoA mutase (EC 5.4.99.63) from Methylorubrum extorquens (see paper)
37% identity, 86% coverage of query (383 bits)
ECM_CERS4 / Q3IZ90 Ethylmalonyl-CoA mutase; EC 5.4.99.63 from Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.) (Rhodobacter sphaeroides) (see paper)
Q3IZ90 ethylmalonyl-CoA mutase (EC 5.4.99.63) from Cereibacter sphaeroides (see paper)
39% identity, 86% coverage of query (383 bits)
ECM_METEA / Q49115 Ethylmalonyl-CoA mutase; EC 5.4.99.63 from Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1) (Methylobacterium extorquens) (see 3 papers)
37% identity, 86% coverage of query (383 bits)
Caur_2509 / A9WI24 methylmalonyl-CoA mutase small subunit (EC 5.4.99.2) from Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) (see paper)
32% identity, 93% coverage of query (305 bits)
PCMA_XANP2 / A7IQE5 Pivalyl-CoA mutase large subunit; PCM large subunit; Pivalyl-CoA mutase, substrate-binding subunit; EC 5.4.99.- from Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) (see paper)
34% identity, 71% coverage of query (275 bits)
Build an alignment for Ac3H11_2278 and 35 homologs with ≥ 30% identity
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Lawrence Berkeley National Laboratory