Searching for up to 100 curated homologs for Ac3H11_3228 FitnessBrowser__acidovorax_3H11:Ac3H11_3228 (170 a.a.)
Found high-coverage hits (≥70%) to 4 curated proteins.
Removed hits that are identical to the query, leaving 3
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
Psest_2123 fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter from Pseudomonas stutzeri RCH2
42% identity, 75% coverage of query (91.7 bits)
YiaM / b3577 2,3-diketo-L-gulonate:Na+ symporter - membrane subunit from Escherichia coli K-12 substr. MG1655 (see 3 papers)
yiaM / P37674 2,3-diketo-L-gulonate:Na+ symporter - membrane subunit from Escherichia coli (strain K12) (see 2 papers)
YIAM_ECOLI / P37674 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM from Escherichia coli (strain K12) (see paper)
TC 2.A.56.1.2 / P37674 YiaM, component of The 2,3-diketo-L-gulonate (2,3-DKG) transporter, YiaMNO [2,3-KDG is a breakdown product of L-ascorbate] from Escherichia coli (see 7 papers)
35% identity, 71% coverage of query (76.3 bits)
Build an alignment for Ac3H11_3228 and 2 homologs with ≥ 30% identity
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Shew_1445 dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), small permease component from Shewanella loihica PV-4
23% identity, 76% coverage of query (47.4 bits)
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Lawrence Berkeley National Laboratory