Searching for up to 100 curated homologs for Ac3H11_3956 FitnessBrowser__acidovorax_3H11:Ac3H11_3956 (172 a.a.)

Found high-coverage hits (≥70%) to 3 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

PP_1168 D-glucuronate / D-galacturonate TRAP transporter, small permease component from Pseudomonas putida KT2440
    58% identity, 100% coverage of query (198 bits)

YiaM / b3577 2,3-diketo-L-gulonate:Na⁺ symporter - membrane subunit from Escherichia coli K-12 substr. MG1655 (see 3 papers)
yiaM / P37674 2,3-diketo-L-gulonate:Na⁺ symporter - membrane subunit from Escherichia coli (strain K12) (see 2 papers)
YIAM_ECOLI / P37674 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM from Escherichia coli (strain K12) (see paper)
TC 2.A.56.1.2 / P37674 YiaM, component of The 2,3-diketo-L-gulonate (2,3-DKG) transporter, YiaMNO [2,3-KDG is a breakdown product of L-ascorbate] from Escherichia coli (see 7 papers)
    30% identity, 84% coverage of query (56.2 bits)

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Build an alignment for Ac3H11_3956 and 2 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

SIAQ_VIBCH / Q9KR65 Sialic acid TRAP transporter small permease protein SiaQ from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (see 2 papers)
TC 2.A.56.1.6 / B9TSN0 TRAP-type C4-dicarboxylate transport system small permease component, component of The Na+-dependent sialic acid uptake porter, SiaPQM. SiaQ and SiaM form a 1:1 stoichiometric complex from Vibrio cholerae (see paper)
    25% identity, 72% coverage of query (47.8 bits)

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