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Searching for up to 100 curated homologs for Ac3H11_4162 FitnessBrowser__acidovorax_3H11:Ac3H11_4162 (329 a.a.)

Found high-coverage hits (≥70%) to 32 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

gluQ / PDB|1NZJ glutamyl-Q tRNA(Asp) synthetase; EC 6.1.1.- from Escherichia coli K12 (see 9 papers)
    42% identity, 94% coverage of query (192 bits)

GluQ / b0144 glutamyl-Q tRNAAsp synthetase from Escherichia coli K-12 substr. MG1655 (see 10 papers)
gluQ / P27305 glutamyl-Q tRNAAsp synthetase from Escherichia coli (strain K12) (see 9 papers)
GLUQ_ECOLI / P27305 Glutamyl-Q tRNA(Asp) synthetase; Glu-Q-RSs; EC 6.1.1.- from Escherichia coli (strain K12) (see 3 papers)
    42% identity, 94% coverage of query (192 bits)

4a91A / P27305 Crystal structure of the glutamyl-queuosine trnaasp synthetase from e. Coli complexed with l-glutamate (see paper)
    41% identity, 94% coverage of query (186 bits)

8i9iA / P04805 Glutamyl-tRNA synthetase from escherichia coli bound to glutamate and zinc
    37% identity, 80% coverage of query (155 bits)

GltM / b2400 glutamate—tRNA ligase (EC 6.1.1.17) from Escherichia coli K-12 substr. MG1655 (see 39 papers)
gltX / P04805 glutamate—tRNA ligase (EC 6.1.1.17) from Escherichia coli (strain K12) (see 39 papers)
SYE_ECOLI / P04805 Glutamate--tRNA ligase; Glutamyl-tRNA synthetase; GluRS; EC 6.1.1.17 from Escherichia coli (strain K12) (see 9 papers)
gltX / GB|AAC75457.1 glutamyl-tRNA synthetase; EC 6.1.1.17 from Escherichia coli K12 (see 10 papers)
    37% identity, 80% coverage of query (153 bits)

SYE_THEVB / Q8DLI5 Glutamate--tRNA ligase; Glutamyl-tRNA synthetase; GluRS; EC 6.1.1.17 from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1) (see paper)
    38% identity, 80% coverage of query (151 bits)

2cfoA / Q8DLI5 Non-discriminating glutamyl-tRNA synthetase from thermosynechococcus elongatus in complex with glu (see paper)
    38% identity, 80% coverage of query (151 bits)

SYEM_YEAST / P48525 Glutamate--tRNA ligase, mitochondrial; Glutamyl-tRNA synthetase; GluRS; EC 6.1.1.17 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
    33% identity, 80% coverage of query (141 bits)

SYEM_HUMAN / Q5JPH6 Nondiscriminating glutamyl-tRNA synthetase EARS2, mitochondrial; Glutamate--tRNA(Gln) ligase EARS2, mitochondrial; Glutamyl-tRNA synthetase; GluRS; Mitochondrial glutamyl-tRNA synthetase; mtGluRS; EC 6.1.1.24; EC 6.1.1.17 from Homo sapiens (Human) (see 4 papers)
    34% identity, 81% coverage of query (137 bits)

CCNA_01982 glutamyl-tRNA(Glx) synthetase (EC 6.1.1.24) from Caulobacter crescentus NA1000
    35% identity, 84% coverage of query (136 bits)

SYEM_ARATH / Q9FEA2 Glutamate--tRNA ligase, chloroplastic/mitochondrial; AtERS; Glutamyl-tRNA synthetase; GluRS; Protein OVULE ABORTION 3; EC 6.1.1.17 from Arabidopsis thaliana (Mouse-ear cress) (see 5 papers)
    32% identity, 80% coverage of query (135 bits)

Q9X2I8 glutamate-tRNAGln ligase (EC 6.1.1.24) from Thermotoga maritima (see paper)
    31% identity, 81% coverage of query (132 bits)

3al0C / Q9WY94,Q9X2I8 Crystal structure of the glutamine transamidosome from thermotoga maritima in the glutamylation state. (see paper)
    31% identity, 81% coverage of query (132 bits)

4g6zA / Q2SX36 Crystal structure of a glutamyl-tRNA synthetase glurs from burkholderia thailandensis bound to l-glutamate (see paper)
    34% identity, 80% coverage of query (128 bits)

gltX / P22250 glutamyl-tRNAGlx synthetase (EC 6.1.1.17; EC 6.1.1.24) from Bacillus subtilis (strain 168) (see 4 papers)
    31% identity, 79% coverage of query (127 bits)

6brlA / A0A1T3HI54 Crystal structure of a glutamate tRNA ligase from elizabethkingia meningosepticum ccug26117 in complex with its amino acid (see paper)
    30% identity, 80% coverage of query (124 bits)

4griB / O51345 Crystal structure of a glutamyl-tRNA synthetase glurs from borrelia burgdorferi bound to glutamic acid and zinc (see paper)
    31% identity, 80% coverage of query (122 bits)

SYE_THET8 / P27000 Glutamate--tRNA ligase; Glutamyl-tRNA synthetase; GluRS; EC 6.1.1.17 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see 2 papers)
2cuzA / P27000 Glutamyl-tRNA synthetase from thermus thermophilus in complex with l- glutamate (see paper)
    33% identity, 81% coverage of query (117 bits)

1g59A Glutamyl-tRNA synthetase complexed with tRNA(glu).
    33% identity, 81% coverage of query (117 bits)

2cv2A Glutamyl-tRNA synthetase from thermus thermophilus in complex with tRNA(glu) and an enzyme inhibitor, glu-ams
    33% identity, 81% coverage of query (117 bits)

2cv1A Glutamyl-tRNA synthetase from thermus thermophilus in complex with tRNA(glu), atp, and an analog of l-glutamate: a quaternary complex
    33% identity, 81% coverage of query (117 bits)

1n78A Crystal structure of thermus thermophilus glutamyl-tRNA synthetase complexed with tRNA(glu) and glutamol-amp.
    33% identity, 81% coverage of query (117 bits)

1j09A Crystal structure of thermus thermophilus glutamyl-tRNA synthetase complexed with atp and glu
    33% identity, 81% coverage of query (117 bits)

Q9XCL6 glutamate-tRNA ligase (EC 6.1.1.17) from Pseudomonas aeruginosa (see paper)
    32% identity, 84% coverage of query (116 bits)

8vc5A / Q9XCL6 Crystal structure of glutamyl-tRNA synthetase glurs from pseudomonas aeruginosa (zinc bound)
    32% identity, 84% coverage of query (116 bits)

SYEM_SCHPO / Q9HDX9 Glutamate--tRNA ligase, mitochondrial; Glutamyl-tRNA synthetase; GluRS; EC 6.1.1.17 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
    32% identity, 81% coverage of query (110 bits)

SYE2_HELPY / O25360 GlutamylGlutaminyl-tRNA synthetase; GluGlnRS; Glutamate--tRNA ligase 2; GluRS 2; Glutamyl-tRNA synthetase 2; EC 6.1.1.- from Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori) (see 2 papers)
    30% identity, 80% coverage of query (110 bits)

P9WFV9 glutamate-tRNA ligase (EC 6.1.1.17) from Mycobacterium tuberculosis (see paper)
    36% identity, 79% coverage of query (110 bits)

Build an alignment

Build an alignment for Ac3H11_4162 and 28 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

Q8IDD3 glutamate-tRNAGln ligase (EC 6.1.1.24) from Plasmodium falciparum (see paper)
    26% identity, 80% coverage of query (109 bits)

A7AS98 glutamate-tRNA ligase (EC 6.1.1.17) from Babesia bovis (see paper)
    28% identity, 79% coverage of query (103 bits)

O26157 glutamate-tRNA ligase (EC 6.1.1.17) from Methanobacterium thermoautotrophicus (see paper)
gltX / GI|2621087 glutamate--tRNA ligase, non-discriminating; EC 6.1.1.17 from Methanothermobacter thermautotrophicus str. Delta H (see paper)
    28% identity, 79% coverage of query (71.2 bits)

3aiiA / O26157 Archaeal non-discriminating glutamyl-tRNA synthetase from methanothermobacter thermautotrophicus (see paper)
    27% identity, 74% coverage of query (63.2 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory