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Searching for up to 100 curated homologs for Ac3H11_693 FitnessBrowser__acidovorax_3H11:Ac3H11_693 (428 a.a.)

Found high-coverage hits (≥70%) to 13 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

AO356_00450 D-glucosaminate dehydratase (EC 4.3.1.9) from Pseudomonas fluorescens FW300-N2C3
    40% identity, 92% coverage of query (261 bits)

Pf6N2E2_2047 D-glucosaminate dehydratase (EC 4.3.1.9) from Pseudomonas fluorescens FW300-N2E2
    39% identity, 92% coverage of query (258 bits)

AO353_21740 D-glucosaminate dehydratase (EC 4.3.1.9) from Pseudomonas fluorescens FW300-N2E3
    39% identity, 94% coverage of query (254 bits)

A0R578 cysteine-tRNA ligase (EC 6.1.1.16) from Mycolicibacterium smegmatis (see paper)
    40% identity, 99% coverage of query (248 bits)

PfGW456L13_2867 D-glucosaminate dehydratase (EC 4.3.1.9) from Pseudomonas fluorescens GW456-L13
    37% identity, 92% coverage of query (246 bits)

PS417_12125 D-glucosaminate dehydratase (EC 4.3.1.9) from Pseudomonas simiae WCS417
PS417_12125 / A0A1N7U313 glucosaminate ammonia-lyase (EC 4.3.1.9) from Pseudomonas simiae (see 3 papers)
    37% identity, 92% coverage of query (242 bits)

Build an alignment

Build an alignment for Ac3H11_693 and 6 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

A0A0J9X243 D-threonine aldolase (EC 4.1.2.42) from Achromobacter xylosoxidans (see paper)
    28% identity, 88% coverage of query (92.4 bits)

4v15A / A0A0J9X243 Crystal structure of d-threonine aldolase from alcaligenes xylosoxidans (see paper)
    28% identity, 88% coverage of query (92.0 bits)

DTA_ARTSP / O82872 D-threonine aldolase; EC 4.1.2.42 from Arthrobacter sp. (see 2 papers)
O82872 D-threonine aldolase (EC 4.1.2.42) from Arthrobacter sp. (see paper)
    28% identity, 88% coverage of query (82.8 bits)

7yqaB / A0A1C9ZZ39 Crystal structure of d-threonine aldolase from chlamydomonas reinhardtii (see paper)
    27% identity, 88% coverage of query (70.9 bits)

A0A1C9ZZ39 D-threonine aldolase (EC 4.1.2.42) from Chlamydomonas reinhardtii (see 2 papers)
    27% identity, 88% coverage of query (66.2 bits)

6qkbA / A1B8Z1 Crystal structure of the beta-hydroxyaspartate aldolase of paracoccus denitrificans (see paper)
    24% identity, 72% coverage of query (58.2 bits)

BHCC_PARDP / A1B8Z1 3-hydroxy-D-aspartate aldolase; beta-hydroxyaspartate aldolase; EC 4.1.3.41 from Paracoccus denitrificans (strain Pd 1222) (see paper)
    24% identity, 72% coverage of query (57.8 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory