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Searching for up to 100 curated homologs for BPHYT_RS04810 FitnessBrowser__BFirm:BPHYT_RS04810 (112 a.a.)

Found high-coverage hits (≥70%) to 11 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Echvi_1841 predicted cytochrome c component of periplasmic glucoside 3-dehydrogenase (EC 1.1.99.13) from Echinicola vietnamensis KMM 6221, DSM 17526
    44% identity, 72% coverage of query (85.9 bits)

6kq1A Crystal structure of cytochrome c551 from pseudomonas sp. Strain mt-1.
    51% identity, 72% coverage of query (82.0 bits)

P00099 Cytochrome c-551; Cytochrome C8; Cytochrome c551 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
    42% identity, 94% coverage of query (80.5 bits)

1cchA / P00101 The solution conformation of cytochromE C-551 from p.Stutzeri zobell determined by nmr+ (see paper)
    52% identity, 72% coverage of query (79.0 bits)

1corA / P00101 Investigation of the solution conformation of cytochromE C-551 from pseudomonas stutzeri (see paper)
    47% identity, 72% coverage of query (78.6 bits)

Q47BB8 S-disulfanyl-L-cysteine oxidoreductase (subunit 1/2) (EC 1.8.2.6) from Dechloromonas aromatica (see paper)
    39% identity, 73% coverage of query (73.9 bits)

2d0sA / Q76IQ6 Crystal structure of the cytochrome c552 from moderate thermophilic bacterium, hydrogenophilus thermoluteolus (see paper)
    42% identity, 71% coverage of query (70.1 bits)

CA265_RS15360 predicted cytochrome c component of periplasmic glucoside 3-dehydrogenase (EC 1.1.99.13) from Pedobacter sp. GW460-11-11-14-LB5
    33% identity, 98% coverage of query (69.7 bits)

TC 5.B.5.1.2 / D5CN26 Cytochrome c class I, component of Four component transenvelope ferrous oxidase, CymA/MtoA/MtoB/MtoD from Sideroxydans lithotrophicus (strain ES-1)
    33% identity, 92% coverage of query (57.0 bits)

4xxlA / D5CN26 Crystal structure of class 1 cytochrome mtod from sideroxydans lithotrophicus es-1 (see paper)
    33% identity, 72% coverage of query (55.1 bits)

cyc8L / BAA94030.1 cytochrome c8 from Rubrivivax gelatinosus (see 3 papers)
    31% identity, 96% coverage of query (53.5 bits)

Build an alignment

Build an alignment for BPHYT_RS04810 and 11 homologs with ≥ 30% identity

Select sequences

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory