Searching for up to 100 curated homologs for BPHYT_RS04860 FitnessBrowser__BFirm:BPHYT_RS04860 (280 a.a.)
Found high-coverage hits (≥70%) to 100 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
TC 3.A.1.14.14 / Q9A197 Putative ferrichrome ABC transporter aka SiuA aka Spy0386, component of The Fe3+ /Fe3+ferrichrome/Fe3+heme uptake porter; SiuABDG (FTSABCD) from Streptococcus pyogenes serotype M1 (see 2 papers)
34% identity, 89% coverage of query (156 bits)
fhuC / GI|2832798 ferrichrome transport ATP-binding protein FhuC from Bacillus subtilis (see paper)
33% identity, 87% coverage of query (150 bits)
FepC / b0588 ferric enterobactin ABC transporter ATP binding subunit (EC 7.2.2.17) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
FepC / P23878 ferric enterobactin ABC transporter ATP binding subunit (EC 7.2.2.17) from Escherichia coli (strain K12) (see 3 papers)
FEPC_ECOLI / P23878 Ferric enterobactin transport ATP-binding protein FepC; EC 7.2.2.17 from Escherichia coli (strain K12) (see 3 papers)
TC 3.A.1.14.2 / P23878 FepC aka B0588, component of Iron (Fe3+)-enterobactin porter from Escherichia coli (see 3 papers)
37% identity, 88% coverage of query (150 bits)
FPUD_BACAN / Q81V82 Petrobactin import ATP-binding protein FpuD; EC 7.2.2.- from Bacillus anthracis (see paper)
36% identity, 84% coverage of query (149 bits)
TC 3.A.1.14.7 / Q9X665 FhuC aka FhuA, component of Iron (Fe3+)-hydroxamate porter (transports Fe3+-ferrichrome and Fe3+-ferrioxamine B with FhuD1, and these compounds plus aerobactin and coprogen with FhuD2) (see 2 papers)
33% identity, 87% coverage of query (145 bits)
TC 3.A.1.14.6 / Q9RCF3 ViuC, component of The iron-vibriobactin/enterobactin uptake porter from Vibrio cholerae (see 2 papers)
36% identity, 87% coverage of query (145 bits)
TC 3.A.1.14.18 / Q32AY3 Hemin import ATP-binding protein hmuV, component of The heme uptake porter, ShuTUV (Burkhard and Wilks, 2008). Transports a single heme per reaction cycle (Mattle et al., 2010). (3-d structure of ShuT is known (2RG7) from Shigella dysenteriae serotype 1 (strain Sd197) (see paper)
37% identity, 89% coverage of query (142 bits)
FhuC / b0151 iron(III) hydroxamate ABC transporter ATP binding subunit (EC 7.2.2.16) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
FhuC / P07821 iron(III) hydroxamate ABC transporter ATP binding subunit (EC 7.2.2.16) from Escherichia coli (strain K12) (see paper)
FHUC_ECOLI / P07821 Iron(3+)-hydroxamate import ATP-binding protein FhuC; Ferric hydroxamate uptake protein C; Ferrichrome transport ATP-binding protein FhuC; Iron(III)-hydroxamate import ATP-binding protein FhuC; EC 7.2.2.16 from Escherichia coli (strain K12) (see 3 papers)
TC 3.A.1.14.3 / P07821 FhuC aka B0151, component of Iron (Fe3+)-hydroxamate (ferrichrome, coprogen, aerobactin, ferrioxamine B, schizakinen, rhodotorulic acid) porter, albomycin porter from Escherichia coli (see 6 papers)
fhuC / GB|BAB96727.2 ferrichrome transport ATP-binding protein FhuC; EC 3.6.3.34 from Escherichia coli K12 (see 8 papers)
35% identity, 86% coverage of query (142 bits)
TC 3.A.1.14.21 / O68877 Hemin import ATP-binding protein HmuV, component of The heme uptake porter, PhuTUV (transports one heme per reaction cycle) from Pseudomonas aeruginosa (see 2 papers)
40% identity, 88% coverage of query (140 bits)
YUSV_BACSU / O32188 Probable siderophore transport system ATP-binding protein YusV from Bacillus subtilis (strain 168) (see 2 papers)
35% identity, 88% coverage of query (139 bits)
BTUDA_HALSA / Q9HQ18 Cobalamin import ATP-binding protein BtuD; Vitamin B12-transporting ATPase; EC 7.6.2.8 from Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) (Halobacterium halobium) (see paper)
40% identity, 80% coverage of query (135 bits)
TC 3.A.1.14.8 / Q8GRB0 PvuE, component of The iron-vibrioferrin uptake porter from Vibrio parahaemolyticus (see paper)
32% identity, 84% coverage of query (135 bits)
FecE / b4287 ferric citrate ABC transporter ATP binding subunit (EC 7.2.2.18) from Escherichia coli K-12 substr. MG1655 (see 2 papers)
FecE / P15031 ferric citrate ABC transporter ATP binding subunit (EC 7.2.2.18) from Escherichia coli (strain K12) (see 2 papers)
FECE_ECOLI / P15031 Fe(3+) dicitrate transport ATP-binding protein FecE; Iron(III) dicitrate transport ATP-binding protein FecE; EC 7.2.2.18 from Escherichia coli (strain K12) (see 3 papers)
TC 3.A.1.14.1 / P15031 Fe(3+) dicitrate transport ATP-binding protein FecE, component of Iron (Fe3+) or ferric-dicitrate porter from Escherichia coli (strain K12) (see 4 papers)
fecE / GB|AAC77243.1 iron(III) dicitrate transport ATP-binding protein FecE from Escherichia coli K12 (see 6 papers)
34% identity, 84% coverage of query (129 bits)
FPUC_BACAN / Q81LM1 Petrobactin import ATP-binding protein FpuC; EC 7.2.2.- from Bacillus anthracis (see paper)
32% identity, 81% coverage of query (125 bits)
TC 3.A.1.14.4 / Q47087 CbrD, component of Iron-chrysobactine porter from Erwinia chrysanthemi (see paper)
cbrD / GB|CAA60669.1 achromobactin ABC transporter, ATP-binding protein CbrD from Erwinia chrysanthemi str. 3937 (see paper)
34% identity, 84% coverage of query (125 bits)
Build an alignment for BPHYT_RS04860 and 15 homologs with ≥ 30% identity
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YCLP_BACSU / P94420 Petrobactin import ATP-binding protein YclP; EC 7.2.2.- from Bacillus subtilis (strain 168) (see paper)
27% identity, 83% coverage of query (123 bits)
TC 3.A.1.14.16 / A8GDS6 HemV, component of The heme-specific uptake porter, HemTUV from Serratia proteamaculans (strain 568)
38% identity, 85% coverage of query (122 bits)
TC 3.A.1.14.5 / Q56993 HmuV aka YPO0279 aka Y0539, component of Heme (hemin) uptake porter. The receptor, HmuT, binds two parallel stacked heme molecules, and two are transported per reaction cycle from Yersinia pestis (see 4 papers)
hmuV hemin import ATP-binding protein hmuV; EC 3.6.3.- from Yersinia pestis KIM (see paper)
37% identity, 81% coverage of query (120 bits)
TC 3.A.1.14.19 / Q93SS1 Hemin import ATP-binding protein hmuV, component of Heme uptake porter, HugBCD (Villarreal et al., 2008); also called HmuTUV from Plesiomonas shigelloides (see paper)
35% identity, 86% coverage of query (119 bits)
TC 3.A.1.14.13 / Q9RK11 CchE, component of Ferric iron-coelichelin uptake porter, CchCDEF from Streptomyces coelicolor (see paper)
37% identity, 92% coverage of query (117 bits)
4fi3C / P06611 Structure of vitamin b12 transporter btucd-f in a nucleotide-bound state (see paper)
35% identity, 85% coverage of query (95.9 bits)
1l7vC Bacterial abc transporter involved in b12 uptake
37% identity, 79% coverage of query (95.5 bits)
7ahhC Opua inhibited inward-facing, sbd docked
31% identity, 81% coverage of query (90.1 bits)
7aheC / Q9KIF7 Opua inhibited inward facing (see paper)
31% identity, 81% coverage of query (90.1 bits)
4hluA / Q9WY65 Structure of the ecfa-a' heterodimer bound to adp (see paper)
29% identity, 81% coverage of query (89.7 bits)
Q8TTZ3 ABC-type molybdate transporter (EC 7.3.2.5) from Methanosarcina acetivorans (see paper)
3d31A / Q8TTZ3 Modbc from methanosarcina acetivorans (see paper)
33% identity, 71% coverage of query (88.6 bits)
4zirA Crystal structure of ecfaa' heterodimer bound to amppnp
28% identity, 81% coverage of query (86.7 bits)
4ymuJ / Q8RCC2 Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
28% identity, 72% coverage of query (85.5 bits)
7ahdC Opua (e190q) occluded
32% identity, 72% coverage of query (85.5 bits)
4u00A / Q5SJ55 Crystal structure of ttha1159 in complex with adp (see paper)
27% identity, 75% coverage of query (81.6 bits)
2awnB / P68187 Crystal structure of the adp-mg-bound e. Coli malk (crystallized with atp-mg) (see paper)
28% identity, 79% coverage of query (80.9 bits)
MalK / b4035 maltose ABC transporter ATP binding subunit (EC 7.5.2.1) from Escherichia coli K-12 substr. MG1655 (see 31 papers)
MalK / P68187 maltose ABC transporter ATP binding subunit (EC 7.5.2.1) from Escherichia coli (strain K12) (see 29 papers)
MALK_ECOLI / P68187 Maltose/maltodextrin import ATP-binding protein MalK; EC 7.5.2.1 from Escherichia coli (strain K12) (see 6 papers)
P68187 ABC-type maltose transporter (subunit 3/3) (EC 7.5.2.1) from Escherichia coli (see paper)
TC 3.A.1.1.1 / P68187 Maltose/maltodextrin import ATP-binding protein MalK aka B4035, component of Maltooligosaccharide porter. The 3-D structure has been reported by Oldham et al. (2007). An altering access mechanism has been suggested for the maltose transporter resulting from rigid-body rotations (Khare et al., 2009). Bordignon et al. (2010) and Schneider et al. (2012) have reviewed the extensive knowledge available on MalEFGK2, its mode of action and its regulatory interactions from Escherichia coli (see 17 papers)
malK / RF|NP_418459 maltose/maltodextrin import ATP-binding protein malK; EC 3.6.3.19 from Escherichia coli K12 (see 18 papers)
28% identity, 79% coverage of query (80.5 bits)
3puyA Crystal structure of an outward-facing mbp-maltose transporter complex bound to amp-pnp after crystal soaking of the pretranslocation state
28% identity, 79% coverage of query (80.5 bits)
3puxA Crystal structure of an outward-facing mbp-maltose transporter complex bound to adp-bef3
28% identity, 79% coverage of query (80.5 bits)
3puwA Crystal structure of an outward-facing mbp-maltose transporter complex bound to adp-alf4
28% identity, 79% coverage of query (80.5 bits)
3puvA Crystal structure of an outward-facing mbp-maltose transporter complex bound to adp-vo4
28% identity, 79% coverage of query (80.5 bits)
MALK_SALTY / P19566 Maltose/maltodextrin import ATP-binding protein MalK; EC 7.5.2.1 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
29% identity, 70% coverage of query (79.3 bits)
1q12A Crystal structure of the atp-bound e. Coli malk
28% identity, 77% coverage of query (79.3 bits)
5x40A / O68106 Structure of a cbio dimer bound with amppcp (see paper)
33% identity, 82% coverage of query (77.4 bits)
1f3oA / Q58206 Crystal structure of mj0796 atp-binding cassette (see paper)
29% identity, 74% coverage of query (77.0 bits)
8dneA Cryoem structure of the a.Aeolicus wzmwzt transporter bound to atp
26% identity, 87% coverage of query (76.6 bits)
8cask / Q03195 Cryo-em structure of native otu2-bound ubiquitinated 48s initiation complex (partial) (see paper)
27% identity, 80% coverage of query (75.9 bits)
8hf7B Cryo-em structure of coma bound to its mature substrate csp peptide
30% identity, 76% coverage of query (75.9 bits)
5ll6h Structure of the 40s abce1 post-splitting complex in ribosome recycling and translation initiation
28% identity, 71% coverage of query (75.5 bits)
RLI1_YEAST / Q03195 Translation initiation factor RLI1; ATP-binding cassette sub-family E member RLI1; RNase L inhibitor from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 6 papers)
4crmP / Q03195 Cryo-em of a pre-recycling complex with erf1 and abce1 (see paper)
28% identity, 71% coverage of query (75.5 bits)
3j16B Models of ribosome-bound dom34p and rli1p and their ribosomal binding partners
28% identity, 71% coverage of query (75.5 bits)
1l2tA Dimeric structure of mj0796, a bacterial abc transporter cassette
28% identity, 74% coverage of query (75.5 bits)
3c4jA Abc protein artp in complex with atp-gamma-s
26% identity, 80% coverage of query (75.5 bits)
3c41J / D0VWX4 Abc protein artp in complex with amp-pnp/mg2+
26% identity, 80% coverage of query (75.5 bits)
2olkA Abc protein artp in complex with adp-beta-s
26% identity, 80% coverage of query (75.5 bits)
2oljA Abc protein artp in complex with adp/mg2+
26% identity, 80% coverage of query (75.5 bits)
7zdbC If(heme/bound) conformation of cyddc in adp+pi(cydc)/atp(cydd) bound state (dataset-2)
31% identity, 80% coverage of query (75.1 bits)
7zdaC If(apo/asym) conformation of cyddc in adp+pi(cydc)/atp(cydd) bound state (dataset-2)
31% identity, 80% coverage of query (75.1 bits)
7zdkC If(apo/asym) conformation of cyddc in amp-pnp(cydc)/amp-pnp(cydd) bound state (dataset-8)
31% identity, 80% coverage of query (75.1 bits)
7zdfC If(heme/confined) conformation of cyddc in amp-pnp(cydd) bound state (dataset-4)
31% identity, 80% coverage of query (75.1 bits)
FtsE / b3463 cell division protein FtsE from Escherichia coli K-12 substr. MG1655 (see 9 papers)
FTSE_ECOLI / P0A9R7 Cell division ATP-binding protein FtsE from Escherichia coli (strain K12) (see 4 papers)
ftsE cell division ATP-binding protein ftsE from Escherichia coli K12 (see 3 papers)
31% identity, 71% coverage of query (75.1 bits)
8ipsA / P23886 Cryo-em structure of heme transporter cyddc from escherichia coli in the inward facing heme loading state (see paper)
31% identity, 80% coverage of query (75.1 bits)
8w6iD / P0A9R7 Cryo-em structure of escherichia coli str k12 ftsex complex with atp- gamma-s in peptidisc
31% identity, 71% coverage of query (75.1 bits)
8hf4A / A0A0H2ZPI8 Cryo-em structure of nucleotide-bound coma at outward-facing state with ec gate closed conformation (see paper)
29% identity, 76% coverage of query (75.1 bits)
1jj7A / Q03518 Crystal structure of thE C-terminal atpase domain of human tap1 (see paper)
30% identity, 75% coverage of query (74.3 bits)
2ixfA / P36370 Crystal structure of the atpase domain of tap1 with atp (d645q, q678h mutant) (see paper)
33% identity, 70% coverage of query (73.9 bits)
7zdtC Occ(apo/return) conformation of cyddc mutant (e500q.C) in atp(cydc) bound state (dataset-18)
31% identity, 80% coverage of query (73.9 bits)
8hd0A Cell divisome spg hydrolysis machinery ftsex-envc
31% identity, 71% coverage of query (73.9 bits)
8k7aA Cryo-em structure of nucleotide-bound coma e647q mutant with mg2+
29% identity, 76% coverage of query (73.6 bits)
8hf6A Cryo-em structure of nucleotide-bound coma e647q mutant
29% identity, 76% coverage of query (73.6 bits)
ETTA_ECOL6 / A0A0H2VFI8 Energy-dependent translational throttle protein EttA; Translational regulatory factor EttA; EC 3.6.1.- from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (see paper)
33% identity, 75% coverage of query (73.6 bits)
YcbH / b0949 ATP-binding protein Uup from Escherichia coli K-12 substr. MG1655 (see 17 papers)
UUP_ECOLI / P43672 ATP-binding protein Uup; EC 3.6.1.- from Escherichia coli (strain K12) (see 5 papers)
27% identity, 84% coverage of query (73.6 bits)
5ws4A / A0A0D8G707 Crystal structure of tripartite-type abc transporter macb from acinetobacter baumannii (see paper)
28% identity, 71% coverage of query (73.2 bits)
4yerA / Q9X1C3 Crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution
24% identity, 86% coverage of query (73.2 bits)
ABCBA_MOUSE / Q9JI39 ATP-binding cassette sub-family B member 10, mitochondrial; ABC-mitochondrial erythroid protein; ABC-me protein; ATP-binding cassette transporter 10; ABC transporter 10 protein from Mus musculus (Mouse) (see 9 papers)
30% identity, 71% coverage of query (72.8 bits)
3vx4D / Q8DW05 Crystal structure of the nucleotide-binding domain of s. Mutans coma, a bifunctional atp-binding cassette transporter involved in the quorum-sensing pathway (see paper)
25% identity, 86% coverage of query (72.8 bits)
8f5bA / P78363 Human abca4 structure in complex with amp-pnp
30% identity, 85% coverage of query (72.8 bits)
3j5sD / P0A9W3 Etta binds to ribosome exit site and regulates translation by restricting ribosome and tRNA dynamics (see paper)
33% identity, 75% coverage of query (72.4 bits)
YjjK / b4391 energy-dependent translational throttle protein EttA from Escherichia coli K-12 substr. MG1655 (see 9 papers)
ETTA_ECOLI / P0A9W3 Energy-dependent translational throttle protein EttA; Translational regulatory factor EttA; EC 3.6.1.- from Escherichia coli (strain K12) (see 2 papers)
CH_004211 ABC transporter, ATP-binding protein YjiK from Escherichia coli K12 (see paper)
33% identity, 75% coverage of query (72.4 bits)
AB25B_ARATH / Q9LVM1 ABC transporter B family member 25, mitochondrial; ABC transporter ABCB.25; AtABCB25; ABC transporter of the mitochondrion 3; AtATM3; Iron-sulfur clusters transporter ATM3; Protein STARIK 1 from Arabidopsis thaliana (Mouse-ear cress) (see 6 papers)
TC 3.A.1.210.8 / Q9LVM1 Mitochondrial ABC transporter, ATM3, involved in iron homeostasis (Chen et al. 2007) and heavy metal resistance (Kim et al. 2006). There are three isoforms: ATM1, ATM2 and ATM3 (Chen et al., 2007). ATM3 can replace the yeast iron/sulfur cluster exporter better than ATM1 or ATM2. Atm3 is most similar to the human and yeast homologues, TC# 3.A.1.210.4 and 3.A.1.210.1, 51% and 47% identical, respectively from Arabidopsis thaliana (Mouse-ear cress) (see 11 papers)
GB|AAN13224.1 putative ABC transporter protein from Arabidopsis thaliana (see paper)
29% identity, 76% coverage of query (72.4 bits)
7arlD Lolcde in complex with lipoprotein and adp
31% identity, 71% coverage of query (72.0 bits)
7mdyC Lolcde nucleotide-bound
31% identity, 71% coverage of query (72.0 bits)
LolD / b1117 lipoprotein release complex - ATP binding subunit from Escherichia coli K-12 substr. MG1655 (see 2 papers)
LolD / P75957 lipoprotein release complex - ATP binding subunit from Escherichia coli (strain K12) (see paper)
LOLD_ECOLI / P75957 Lipoprotein-releasing system ATP-binding protein LolD; EC 7.6.2.- from Escherichia coli (strain K12) (see paper)
TC 3.A.1.125.1 / P75957 LolD aka B1117, component of Lipoprotein translocation system (translocates lipoproteins from the inner membrane to periplasmic chaperone, LolA, which transfers the lipoproteins to an outer membrane receptor, LolB, which anchors the lipoprotein to the outer membrane of the Gram-negative bacterial cell envelope) (see 1.B.46; Narita et al., 2003; Ito et al., 2006; Watanabe et al., 2007). The structure of ligand-bound LolCDE has been solved (Ito et al., 2006). LolC and LolE each have 4 TMSs (1+3). Unlike most ATP binding cassette transporters mediating the transmembrane flux of substrates, the LolCDE complex catalyzes the extrusion of lipoproteins anchored to the outer leaflet of the inner membrane. The LolCDE complex is unusual in that it can be purified as a liganded form, which is an intermediate of the lipoprotein release reaction (Taniguchi and Tokuda, 2008). LolCDE has been reconstituted from separated subunits from Escherichia coli (see 5 papers)
lolD / GB|BAA35937.2 lipoprotein releasing system, ATP-binding protein; EC 3.6.3.- from Escherichia coli K12 (see 5 papers)
31% identity, 71% coverage of query (72.0 bits)
7n5aA Structure of atatm3 in the closed conformation
29% identity, 76% coverage of query (71.6 bits)
7n59A / Q9LVM1 Structure of atatm3 in the inward-facing conformation with gssg bound (see paper)
29% identity, 76% coverage of query (71.6 bits)
TAP1_HUMAN / Q03518 Antigen peptide transporter 1; APT1; ATP-binding cassette sub-family B member 2; Peptide supply factor 1; Peptide transporter PSF1; PSF-1; Peptide transporter TAP1; Peptide transporter involved in antigen processing 1; Really interesting new gene 4 protein; RING4; EC 7.4.2.14 from Homo sapiens (Human) (see 30 papers)
Q03518 ABC-type antigen peptide transporter (EC 7.4.2.14); bacterial ABC-type protein transporter (EC 7.4.2.5) from Homo sapiens (see 2 papers)
30% identity, 75% coverage of query (71.2 bits)
7v8iD / P75957 Lolcd(e171q)e with bound amppnp in nanodiscs (see paper)
31% identity, 71% coverage of query (70.5 bits)
4ayxA / Q9NRK6 Structure of the human mitochondrial abc transporter, abcb10 (rod form b) (see paper)
28% identity, 73% coverage of query (70.5 bits)
ABCBA_HUMAN / Q9NRK6 ATP-binding cassette sub-family B member 10, mitochondrial; ABC-mitochondrial erythroid protein; ABC-me protein; ATP-binding cassette transporter 10; ABC transporter 10 protein; Mitochondrial ATP-binding cassette 2; M-ABC2 from Homo sapiens (Human) (see 7 papers)
Q9NRK6 bacterial ABC-type protein transporter (EC 7.4.2.5) from Homo sapiens (see paper)
28% identity, 73% coverage of query (70.1 bits)
sugC / P9WQI3 ABC-type trehalose transporter ATP-binding protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
SUGC_MYCTU / P9WQI3 Trehalose import ATP-binding protein SugC; MtbSugC; Nucleotide-binding domain of SugABC transporter; NBD of SugABC transporter; SugABC transporter ATPase SugC; EC 7.5.2.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
TC 3.A.1.1.31 / O50454 PROBABLE SUGAR-TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER SUGC, component of The trehalose-recycling ABC transporter, LpqY-SugA-SugB-SugC (essential for virulence) from Mycobacterium tuberculosis (see 2 papers)
27% identity, 74% coverage of query (69.7 bits)
8dncA Cryoem structure of the a. Aeolicus wzmwzt transporter bound to the native o antigen and adp
24% identity, 87% coverage of query (69.3 bits)
8dkuA / O67181 Cryoem structure of the a. Aeolicus wzmwzt transporter bound to the native o antigen (see paper)
24% identity, 87% coverage of query (69.3 bits)
P0A9U3 Probable ATP-binding protein YbiT from Escherichia coli (strain K12)
27% identity, 83% coverage of query (68.9 bits)
YbiT / b0820 putative ATP-binding protein YbiT from Escherichia coli K-12 substr. MG1655 (see 7 papers)
YBIT_ECOL6 / P0A9U4 Probable ATP-binding protein YbiT from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (see paper)
ybiT / MB|P0A9U3 uncharacterized ABC transporter ATP-binding protein ybiT from Escherichia coli K12 (see 2 papers)
27% identity, 83% coverage of query (68.9 bits)
TAP1_RAT / P36370 Antigen peptide transporter 1; APT1; ATP-binding cassette sub-family B member 2; Peptide transporter TAP1; EC 7.4.2.14 from Rattus norvegicus (Rat) (see 2 papers)
P36370 ABC-type antigen peptide transporter (subunit 2/2) (EC 7.4.2.14) from Rattus norvegicus (see 6 papers)
31% identity, 70% coverage of query (68.9 bits)
ABCE1_DROME / Q9VSS1 Protein Pixie; ATP-binding cassette sub-family E member 1 from Drosophila melanogaster (Fruit fly) (see 5 papers)
29% identity, 78% coverage of query (68.9 bits)
MITOS_HUMAN / Q9NUT2 Mitochondrial potassium channel ATP-binding subunit; ATP-binding cassette sub-family B member 8, mitochondrial; ABCB8; Mitochondrial ATP-binding cassette 1; M-ABC1; Mitochondrial sulfonylurea-receptor; MITOSUR from Homo sapiens (Human) (see 5 papers)
Q9NUT2 bacterial ABC-type protein transporter (EC 7.4.2.5) from Homo sapiens (see paper)
TC 3.A.1.201.22 / Q9NUT2 Mitochondrial ATP-binding cassette 1, ABCB8 from Homo sapiens
31% identity, 78% coverage of query (68.2 bits)
ABCA4_HUMAN / P78363 Retinal-specific phospholipid-transporting ATPase ABCA4; ATP-binding cassette sub-family A member 4; RIM ABC transporter; RIM proteinv; RmP; Retinal-specific ATP-binding cassette transporter; Stargardt disease protein; EC 7.6.2.1 from Homo sapiens (Human) (see 38 papers)
TC 3.A.1.211.2 / P78363 The retinal-specific ABC transporter (RIM protein, ABCR or ABCA4) (Stargardt's disease protein, involved in retinal/macular degeneration) in the rod outer segment. Changes in the oligomeric state of the nucleotide binding domains of ABCR are coupled to ATP hydrolysis and might represent a signal for the TMDs of ABCR to export the bound substrate (Biswas-Fiss 2006). The ABCA4 porter flips N-retinylidene-phosphatidylethanolamine, a product generated from the photobleaching of rhodopsin, from the lumen to the cytoplasmic side of disc membranes following the photobleaching of rhodopsin, insuring that retinoids do not accumulate in disc membranes (Molday, 2007; Molday et al. 2009; Tsybovsky et al. 2013). It also transports several vitamin A derivatives (Sun, 2011) and phosphatidylethanolamine in the same direction. Mutations, known to cause Stargardt disease, decrease N-retinylidene-phosphatidylethanolamine and phosphatidylethanolamine transport activities (Quazi et al. 2012). It functions as an inwardly directed retinoid flippase in the visual cycle from Homo sapiens (Human) (see 28 papers)
30% identity, 82% coverage of query (68.2 bits)
ABCAD_MOUSE / Q5SSE9 ATP-binding cassette sub-family A member 13; EC 7.6.2.- from Mus musculus (Mouse) (see 3 papers)
26% identity, 74% coverage of query (67.8 bits)
7lkpA Structure of atp-free human abca4
30% identity, 80% coverage of query (67.8 bits)
7y48B Cryo-em structure of biliverdin-bound mitochondrial abc transporter abcb10 from biortus
27% identity, 73% coverage of query (67.8 bits)
7e7oA / P78363 Cryo-em structure of human abca4 in nrpe-bound state (see paper)
30% identity, 80% coverage of query (67.4 bits)
6zvj1 of a human ABCE1-bound 43S pre-initiation complex - State II
27% identity, 78% coverage of query (67.4 bits)
7o80Bz / G1SG72 7o80Bz (see paper)
26% identity, 80% coverage of query (67.4 bits)
ABCE1_HUMAN / P61221 ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I; EC 3.6.5.- from Homo sapiens (Human) (see 8 papers)
ABCE1_MOUSE / P61222 ATP-binding cassette sub-family E member 1; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I; EC 3.6.5.- from Mus musculus (Mouse) (see paper)
26% identity, 80% coverage of query (67.4 bits)
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Lawrence Berkeley National Laboratory