Searching for up to 100 curated homologs for BPHYT_RS08720 FitnessBrowser__BFirm:BPHYT_RS08720 (208 a.a.)
Found high-coverage hits (≥70%) to 15 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
SO1319 putative transporter, required for glycine utilization from Shewanella oneidensis MR-1
43% identity, 91% coverage of query (131 bits)
TC 1.A.62.2.1 / A0M015 Bacterial TRIC family homologue from Gramella forsetii (strain KT0803) (see paper)
35% identity, 94% coverage of query (127 bits)
TC 1.A.62.3.2 / Q9RKM3 UPF0126 of 7 TMSs. Adjacent to genes encoding a putative oligopeptide ABC uptake permease that controls sporulation and actinorhodin production (TC#3.A.1.5.34) from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
46% identity, 94% coverage of query (124 bits)
TC 1.A.62.3.1 / Q981D4 Archaeal TRIC family homologue of 205 aas and 7 TMSs from Sulfolobus solfataricus (see paper)
34% identity, 92% coverage of query (116 bits)
PS417_02455 putative transporter, required for glycine utilization from Pseudomonas simiae WCS417
38% identity, 88% coverage of query (111 bits)
SO3342 putative transporter, required for L-alanine utilization from Shewanella oneidensis MR-1
35% identity, 91% coverage of query (107 bits)
Shewana3_1204 putative transporter, required for glycine and L-alanine utilization from Shewanella sp. ANA-3
35% identity, 91% coverage of query (107 bits)
PGA1_c00920 putative transporter, required for glycine utilization from Phaeobacter inhibens BS107
39% identity, 95% coverage of query (106 bits)
Pf6N2E2_3621 putative transporter, required for glycine utilization from Pseudomonas fluorescens FW300-N2E2
38% identity, 88% coverage of query (106 bits)
AO353_13110 putative transporter, required for glycine utilization from Pseudomonas fluorescens FW300-N2E3
38% identity, 88% coverage of query (103 bits)
PfGW456L13_161 putative transporter, required for glycine utilization from Pseudomonas fluorescens GW456-L13
36% identity, 88% coverage of query (103 bits)
Psest_1636 putative transporter, required for glycine utilization from Pseudomonas stutzeri RCH2
37% identity, 88% coverage of query (98.2 bits)
TC 1.A.62.2.4 / A4WTL9 TRIC family homologue of 213 aas and 7 TMSs; it's high resolution 3-d structure is known (PDB# 5H36). TRIC channels are implicated in Ca2+ signaling and homeostasis from Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)
37% identity, 96% coverage of query (96.3 bits)
YadS / b0157 PF03458 family protein YadS from Escherichia coli K-12 substr. MG1655 (see 2 papers)
37% identity, 96% coverage of query (95.5 bits)
YicG / b3646 PF03458 family inner membrane protein YicG from Escherichia coli K-12 substr. MG1655 (see 2 papers)
37% identity, 73% coverage of query (86.7 bits)
Build an alignment for BPHYT_RS08720 and 15 homologs with ≥ 30% identity
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Lawrence Berkeley National Laboratory