Searching for up to 100 curated homologs for BPHYT_RS12000 FitnessBrowser__BFirm:BPHYT_RS12000 (351 a.a.)

Found high-coverage hits (≥70%) to 12 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

PGA1_c07300 Inositol transport system sugar-binding protein from Phaeobacter inhibens BS107
    49% identity, 91% coverage of query (326 bits)

4ru1A / A0LVW8 Crystal structure of carbohydrate transporter acei_1806 from acidothermus cellulolyticus 11b, target efi-510965, in complex with myo-inositol
    31% identity, 87% coverage of query (137 bits)

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Build an alignment for BPHYT_RS12000 and 2 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

6gt9A / W8QN64 Crystal structure of ganp, a glucose-galactose binding protein from geobacillus stearothermophilus, in complex with galactose
    29% identity, 71% coverage of query (89.7 bits)

6guqA Crystal structure of ganp, a glucose-galactose binding protein from geobacillus stearothermophilus, in complex with glucose
    29% identity, 71% coverage of query (89.7 bits)

2h3hA / Q9WXW9 Crystal structure of the liganded form of thermotoga maritima glucose binding protein (see paper)
    24% identity, 84% coverage of query (76.6 bits)

3c6qC Apo and ligand-bound form of a thermophilic glucose/xylose binding protein
    23% identity, 84% coverage of query (76.3 bits)

2ioyA / Q8RD41 Crystal structure of thermoanaerobacter tengcongensis ribose binding protein (see paper)
    27% identity, 75% coverage of query (68.6 bits)

5xssA / A6LW07 Xylfii molecule (see paper)
    22% identity, 71% coverage of query (59.3 bits)

UxaR / VIMSS4205073 UxaR regulator of Glucuronate utilization; Galacturonate utilization, effector Glucuronate; Galacturonate (repressor) from Bacteroides ovatus ATCC 8483
    23% identity, 81% coverage of query (58.5 bits)

4wutA / B9K0B2 Crystal structure of an abc transporter solute binding protein (ipr025997) from agrobacterium vitis (avi_5133, target efi-511220) with bound d-fucose
    23% identity, 70% coverage of query (55.8 bits)

HSERO_RS05260 ABC transporter for L-fucose, substrate-binding component from Herbaspirillum seropedicae SmR1
    25% identity, 78% coverage of query (54.7 bits)

RbsB / b3751 ribose ABC transporter periplasmic binding protein from Escherichia coli K-12 substr. MG1655 (see 25 papers)
RbsB / P02925 ribose ABC transporter periplasmic binding protein from Escherichia coli (strain K12) (see 25 papers)
RBSB_ECOLI / P02925 Ribose import binding protein RbsB from Escherichia coli (strain K12) (see 5 papers)
TC 3.A.1.2.1 / P02925 RbsB aka RBSP aka PRLB aka B3751, component of Ribose porter from Escherichia coli (see 11 papers)
rbsB / GB|AAC76774.1 D-ribose-binding periplasmic protein; EC 3.6.3.17 from Escherichia coli K12 (see 11 papers)
    25% identity, 84% coverage of query (50.1 bits)

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