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Searching for up to 100 curated homologs for BPHYT_RS13920 FitnessBrowser__BFirm:BPHYT_RS13920 (305 a.a.)

Found high-coverage hits (≥70%) to 9 curated proteins.

Removed hits that are identical to the query, leaving 8

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

HSERO_RS12135 Myo-inosose-2 dehydratase (EC 4.2.1.44) from Herbaspirillum seropedicae SmR1
    73% identity, 100% coverage of query (462 bits)

AO353_21340 Myo-inosose-2 dehydratase (EC 4.2.1.44) from Pseudomonas fluorescens FW300-N2E3
    66% identity, 95% coverage of query (402 bits)

PS417_11855 Myo-inosose-2 dehydratase (EC 4.2.1.44) from Pseudomonas simiae WCS417
    65% identity, 95% coverage of query (397 bits)

AO356_23165 Myo-inosose-2 dehydratase (EC 4.2.1.44) from Pseudomonas fluorescens FW300-N2C3
    65% identity, 94% coverage of query (391 bits)

Pf6N2E2_513 Myo-inosose-2 dehydratase (EC 4.2.1.44) from Pseudomonas fluorescens FW300-N2E2
    65% identity, 94% coverage of query (389 bits)

SMc00433 Myo-inosose-2 dehydratase (EC 4.2.1.44) from Sinorhizobium meliloti 1021
    43% identity, 96% coverage of query (252 bits)

iolE / P42416 scyllo-inosose dehydratase (EC 4.2.1.44) from Bacillus subtilis (strain 168) (see 2 papers)
IOLE_BACSU / P42416 Inosose dehydratase; 2-keto-myo-inositol dehydratase; 2KMI dehydratase; EC 4.2.1.44 from Bacillus subtilis (strain 168) (see paper)
    37% identity, 92% coverage of query (196 bits)

Build an alignment

Build an alignment for BPHYT_RS13920 and 7 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

PGA1_c07270 Myo-inosose-2 dehydratase (EC 4.2.1.44) from Phaeobacter inhibens BS107
    29% identity, 90% coverage of query (114 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory