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Searching for up to 100 curated homologs for BPHYT_RS20760 FitnessBrowser__BFirm:BPHYT_RS20760 (322 a.a.)

Found high-coverage hits (≥70%) to 34 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

3rc1A / B3TMR8 Crystal structure of kijd10, a 3-ketoreductase from actinomadura kijaniata incomplex with NADP and tdp-benzene (see paper)
    32% identity, 98% coverage of query (147 bits)

KIJDR_ACTKI / B3TMR8 dTDP-3,4-didehydro-2,6-dideoxy-alpha-D-glucose 3-reductase; 3-ketoreductase; NADPH-dependent C3-ketoreductase; EC 1.1.1.384 from Actinomadura kijaniata (see paper)
B3TMR8 dTDP-3,4-didehydro-2,6-dideoxy-alpha-D-glucose 3-reductase (EC 1.1.1.384) from Actinomadura kijaniata (see paper)
    32% identity, 98% coverage of query (147 bits)

mtmU / Q194Q3 D-oliose 4-ketoreductase from Streptomyces argillaceus (see paper)
    37% identity, 71% coverage of query (132 bits)

GRA26_STRVN / Q9ZA33 dTDP-3,4-didehydro-2,6-dideoxy-alpha-D-glucose 3-reductase; Gra-orf26 protein; dTDP-3,4-diketo-2,6-dideoxyglucose 3-ketoreductase; EC 1.1.1.384 from Streptomyces violaceoruber
    35% identity, 78% coverage of query (131 bits)

XDH2_HALVD / D4GP30 D-xylose 1-dehydrogenase (NADP(+)) 2; XDH 2; EC 1.1.1.179 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see paper)
D4GP30 D-xylose 1-dehydrogenase (NADP+, D-xylono-1,5-lactone-forming) (EC 1.1.1.179) from Haloferax volcanii (see paper)
    32% identity, 98% coverage of query (131 bits)

oleW / Q9RR32 dTDP-3,4-diketo-2,6-dideoxy-D-glucose 3-ketoreductase (EC 1.1.1.384) from Streptomyces antibioticus (see paper)
OLEW_STRAT / Q9RR32 dTDP-3,4-didehydro-2,6-dideoxy-alpha-D-glucose 3-reductase; dTDP-3,4-diketo-2,6-dideoxyglucose 3-ketoreductase; EC 1.1.1.384 from Streptomyces antibioticus (see paper)
Q9RR32 dTDP-3,4-didehydro-2,6-dideoxy-alpha-D-glucose 3-reductase (EC 1.1.1.384) from Streptomyces antibioticus (see paper)
    32% identity, 99% coverage of query (130 bits)

spnN / Q9ALN5 dTDP-3,4-diketo-2,6-dideoxy-D-glucose 3-ketoreductase (EC 1.1.1.384) from Saccharopolyspora spinosa (see paper)
SPNN_SACSN / Q9ALN5 dTDP-3,4-didehydro-2,6-dideoxy-alpha-D-glucose 3-reductase; dTDP-3,4-diketo-2,6-dideoxy-D-glucose 3-ketoreductase; EC 1.1.1.384 from Saccharopolyspora spinosa (see 2 papers)
Q9ALN5 dTDP-3,4-didehydro-2,6-dideoxy-alpha-D-glucose 3-reductase (EC 1.1.1.384) from Saccharopolyspora spinosa (see paper)
    31% identity, 93% coverage of query (122 bits)

DHDH_CANLF / Q9TV68 Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase; Can2DD; D-xylose 1-dehydrogenase; D-xylose-NADP dehydrogenase; Dimeric dihydrodiol dehydrogenase; EC 1.3.1.20; EC 1.1.1.179 from Canis lupus familiaris (Dog) (Canis familiaris) (see 3 papers)
    34% identity, 75% coverage of query (119 bits)

Q148L6 trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (EC 1.3.1.20) from Bos taurus (see paper)
    34% identity, 75% coverage of query (118 bits)

Q9DBB8 trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (EC 1.3.1.20) from Mus musculus (see paper)
    33% identity, 78% coverage of query (114 bits)

DHDH_PIG / Q9TV69 Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase; D-xylose 1-dehydrogenase; D-xylose-NADP dehydrogenase; Dimeric dihydrodiol dehydrogenase; Sus2DD; EC 1.3.1.20; EC 1.1.1.179 from Sus scrofa (Pig) (see 3 papers)
    31% identity, 86% coverage of query (114 bits)

DHDH_HUMAN / Q9UQ10 Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase; D-xylose 1-dehydrogenase; D-xylose-NADP dehydrogenase; Dimeric dihydrodiol dehydrogenase; Hum2DD; EC 1.3.1.20; EC 1.1.1.179 from Homo sapiens (Human) (see paper)
    33% identity, 77% coverage of query (114 bits)

DHDH_MACFU / Q7JK39 Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase; D-xylose 1-dehydrogenase; D-xylose-NADP dehydrogenase; Dimeric dihydrodiol dehydrogenase; Jmo2DD; EC 1.3.1.20; EC 1.1.1.179 from Macaca fuscata fuscata (Japanese macaque) (see 3 papers)
DHDH_MACFA / Q9TQS6 Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase; Cmo2DD; D-xylose 1-dehydrogenase; D-xylose-NADP dehydrogenase; Dimeric dihydrodiol dehydrogenase; EC 1.3.1.20; EC 1.1.1.179 from Macaca fascicularis (Crab-eating macaque) (Cynomolgus monkey) (see paper)
Q9TQS6 D-xylose 1-dehydrogenase (NADP+, D-xylono-1,5-lactone-forming) (EC 1.1.1.179); trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (EC 1.3.1.20) from Macaca fascicularis (see 2 papers)
    32% identity, 77% coverage of query (112 bits)

2o4uX / Q9TQS6 Crystal structure of mammalian dimeric dihydrodiol dehydrogenase (see paper)
    32% identity, 77% coverage of query (111 bits)

2poqX Dimeric dihydrodiol dehydrogenase complexed with inhibitor, isoascorbic acid
    32% identity, 77% coverage of query (111 bits)

Q5R5J5 trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (EC 1.3.1.20) from Pongo abelii (see paper)
    32% identity, 77% coverage of query (108 bits)

DHDH_RABIT / Q9TV70 Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase; D-xylose 1-dehydrogenase; D-xylose-NADP dehydrogenase; Dimeric dihydrodiol dehydrogenase; Ory2DD; EC 1.3.1.20; EC 1.1.1.179 from Oryctolagus cuniculus (Rabbit) (see 2 papers)
    33% identity, 76% coverage of query (102 bits)

Build an alignment

Build an alignment for BPHYT_RS20760 and 17 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

5a03C / Q9A8X3 Crystal structure of aldose-aldose oxidoreductase from caulobacter crescentus complexed with xylose (see paper)
    26% identity, 99% coverage of query (101 bits)

5a06A Crystal structure of aldose-aldose oxidoreductase from caulobacter crescentus complexed with sorbitol
    26% identity, 99% coverage of query (101 bits)

5a05A Crystal structure of aldose-aldose oxidoreductase from caulobacter crescentus complexed with maltotriose
    26% identity, 99% coverage of query (101 bits)

5a04A Crystal structure of aldose-aldose oxidoreductase from caulobacter crescentus complexed with glucose
    26% identity, 99% coverage of query (101 bits)

5a03E Crystal structure of aldose-aldose oxidoreductase from caulobacter crescentus complexed with xylose
    26% identity, 99% coverage of query (101 bits)

5a02A Crystal structure of aldose-aldose oxidoreductase from caulobacter crescentus complexed with glycerol
    26% identity, 99% coverage of query (101 bits)

jadP / Q939Q8 dTDP-3,4-didehydro-2,6-dideoxy-α-D-glucose reductase (EC 1.1.1.384) from Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) (see paper)
Q939Q8 dTDP-3,4-didehydro-2,6-dideoxy-alpha-D-glucose 3-reductase (EC 1.1.1.384) from Streptomyces venezuelae (see paper)
    32% identity, 77% coverage of query (97.4 bits)

xdh / Q5UY95 D-xylose dehydrogenase subunit (EC 1.1.1.424) from Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (see paper)
GFO6_HALMA / Q5UY95 D-xylose 1-dehydrogenase [NADP(+)]; XDH; EC 1.1.1.424 from Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui) (see paper)
Q5UY95 D-xylose 1-dehydrogenase (NADP+, D-xylono-1,5-lactone-forming) (EC 1.1.1.179); D-xylose 1-dehydrogenase (NADP+, D-xylono-1,4-lactone-forming) (EC 1.1.1.424) from Haloarcula marismortui (see paper)
    25% identity, 92% coverage of query (93.6 bits)

xacA / D4GP29 D-xylose dehydrogenase subunit (EC 1.1.1.424) from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (see 4 papers)
XDH1_HALVD / D4GP29 D-xylose 1-dehydrogenase [NADP(+)] 1; XDH 1; EC 1.1.1.424 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see 3 papers)
D4GP29 D-xylose 1-dehydrogenase (NADP+, D-xylono-1,5-lactone-forming) (EC 1.1.1.179); D-xylose 1-dehydrogenase (NADP+, D-xylono-1,4-lactone-forming) (EC 1.1.1.424) from Haloferax volcanii (see 2 papers)
    27% identity, 91% coverage of query (87.4 bits)

1zh8A / Q9WYE8 Crystal structure of oxidoreductase (tm0312) from thermotoga maritima at 2.50 a resolution
    27% identity, 77% coverage of query (73.2 bits)

D4GR07 L-arabinose 1-dehydrogenase [NAD(P)+] (EC 1.1.1.376) from Haloferax volcanii (see paper)
    26% identity, 71% coverage of query (70.1 bits)

Q9EZV8 inositol 2-dehydrogenase (EC 1.1.1.18) from Sinorhizobium fredii (see paper)
    29% identity, 77% coverage of query (69.7 bits)

4nheB / A0A0H2UR04 The crystal structure of oxidoreductase (gfo/idh/moca family) from streptococcus pneumoniae tigr4 in complex with NADP
    24% identity, 84% coverage of query (67.8 bits)

6jw7A / Q6L737 The crystal structure of kand2 in complex with nadh and 3"-deamino-3"- hydroxykanamycin a (see paper)
    25% identity, 77% coverage of query (58.5 bits)

6jw8A The crystal structure of kand2 in complex with nadh and 3"-deamino-3"- hydroxykanamycin b
    25% identity, 77% coverage of query (58.5 bits)

6jw6A The crystal structure of kand2 in complex with NAD
    25% identity, 77% coverage of query (58.5 bits)

CCNA_01702 predicted 3-ketohexose reductase from Caulobacter crescentus NA1000
    23% identity, 90% coverage of query (54.3 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory