Searching for up to 100 curated homologs for BPHYT_RS22250 FitnessBrowser__BFirm:BPHYT_RS22250 (414 a.a.)
Found high-coverage hits (≥70%) to 18 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
amaD / Q88GX1 D-lysine oxidase (EC 1.4.3.3) from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
53% identity, 99% coverage of query (428 bits)
lhpB / Q88NF6 D-hydroxyproline dehydrogenase subunit from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see 2 papers)
31% identity, 94% coverage of query (154 bits)
Build an alignment for BPHYT_RS22250 and 2 homologs with ≥ 30% identity
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AZOBR_RS08020 D-alanine dehydrogenase (EC 1.4.99.-) from Azospirillum brasilense Sp245
29% identity, 99% coverage of query (123 bits)
Psest_3793 D-alanine dehydrogenase (EC 1.4.99.-) from Pseudomonas stutzeri RCH2
29% identity, 99% coverage of query (115 bits)
DADA1_PSEAE / Q9HTQ0 D-amino acid dehydrogenase 1; D-alanine dehydrogenase 1; EC 1.4.99.- from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
Q9HTQ0 D-arginine dehydrogenase (EC 1.4.99.6) from Pseudomonas aeruginosa (see paper)
27% identity, 98% coverage of query (115 bits)
DadR / b1189 D-amino acid dehydrogenase (EC 1.4.5.1) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
dadA / P0A6J5 D-amino acid dehydrogenase (EC 1.4.5.1) from Escherichia coli (strain K12) (see 22 papers)
DADA_ECOLI / P0A6J5 D-amino acid dehydrogenase; D-alanine dehydrogenase; EC 1.4.99.- from Escherichia coli (strain K12) (see 4 papers)
dadA / AAC36880.1 D-amino acid dehydrogenase from Escherichia coli (see paper)
27% identity, 99% coverage of query (114 bits)
DADA_KLEAE / O30745 D-amino acid dehydrogenase; D-alanine dehydrogenase; EC 1.4.99.- from Klebsiella aerogenes (Enterobacter aerogenes) (see paper)
27% identity, 98% coverage of query (106 bits)
HCNC_PSEAE / G3XD12 Hydrogen cyanide synthase subunit HcnC; HcnC; Glycine dehydrogenase (cyanide-forming); EC 1.4.99.5 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 6 papers)
26% identity, 99% coverage of query (79.7 bits)
Ac3H11_4848 D-alanine dehydrogenase (EC 1.4.99.-) from Acidovorax sp. GW101-3H11
25% identity, 95% coverage of query (77.8 bits)
C7E717 glycine dehydrogenase (cyanide-forming) (subunit 1/3) (EC 1.4.99.5) from Pseudomonas fluorescens (see paper)
26% identity, 100% coverage of query (77.8 bits)
dadA / A3KEZ1 D-amino acid dehydrogenase (EC 1.4.5.1) from Helicobacter pylori (see paper)
DADA_HELPX / A3KEZ1 D-amino acid dehydrogenase; DAD; EC 1.4.5.1 from Helicobacter pylori (Campylobacter pylori) (see paper)
A3KEZ1 D-amino acid dehydrogenase (quinone) (EC 1.4.5.1); D-arginine dehydrogenase (EC 1.4.99.6) from Helicobacter pylori (see 2 papers)
22% identity, 91% coverage of query (76.3 bits)
RR42_RS25930 glycine dehydrogenase (deaminating) (EC 1.4.1.10) from Cupriavidus basilensis FW507-4G11
25% identity, 93% coverage of query (69.7 bits)
Q51890 L-amino-acid oxidase (EC 1.4.3.2) from Proteus mirabilis (see paper)
aad / AAA86752.1 amino acid deaminase from Proteus mirabilis (see paper)
23% identity, 99% coverage of query (69.3 bits)
lhpB / Q9I477 D-hydroxyproline dehydrogenase β subunit from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
26% identity, 99% coverage of query (68.6 bits)
hcnC / O85228 hydrogen cyanide synthase HcnC subunit (EC 1.4.99.5) from Pseudomonas protegens (strain DSM 19095 / LMG 27888 / CFBP 6595 / CHA0) (see paper)
HCNC_PSEPH / O85228 Hydrogen cyanide synthase subunit HcnC; HcnC; Glycine dehydrogenase (cyanide-forming); EC 1.4.99.5 from Pseudomonas protegens (strain DSM 19095 / LMG 27888 / CFBP 6595 / CHA0) (see 3 papers)
25% identity, 99% coverage of query (67.4 bits)
6pxsA / Q11HA4 Crystal structure of iminodiacetate oxidase (idaa) from chelativorans sp. Bnc1 (see paper)
24% identity, 99% coverage of query (57.8 bits)
dpdh / A1RVM8 D-proline dehydrogenase monomer (EC 1.5.99.13) from Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3) (see paper)
DPDH_PYRIL / A1RVM8 D-proline dehydrogenase; D-Pro DH; D-Pro dehydrogenase; EC 1.5.99.13 from Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3) (see 2 papers)
A1RVM8 D-proline dehydrogenase (EC 1.5.99.13) from Pyrobaculum islandicum (see paper)
25% identity, 94% coverage of query (51.2 bits)
1y56B / O59089 Crystal structure of l-proline dehydrogenase from p.Horikoshii (see paper)
20% identity, 95% coverage of query (43.5 bits)
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