Sites on a Tree

 

Searching for up to 100 curated homologs for BPHYT_RS24200 FitnessBrowser__BFirm:BPHYT_RS24200 (61 a.a.)

Found high-coverage hits (≥70%) to 5 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

A2SL37 2-hydroxymuconate tautomerase (EC 5.3.2.6) from Methylibium petroleiphilum (see paper)
    43% identity, 92% coverage of query (53.9 bits)

ywhB / P70994 4-oxalocrotonate tautomerase homolog (EC 5.3.2.1) from Bacillus subtilis (strain 168) (see 5 papers)
4OT_BACSU / P70994 2-hydroxymuconate tautomerase; (2Z,4E)-2-hydroxyhexa-2,4-dienedioate keto-enol isomerase; 4-oxalocrotonate tautomerase; 4-OT; EC 5.3.2.6 from Bacillus subtilis (strain 168) (see paper)
    33% identity, 98% coverage of query (50.4 bits)

2opaA / P70994 Ywhb binary complex with 2-fluoro-p-hydroxycinnamate
    32% identity, 97% coverage of query (48.1 bits)

cnbG / Q38M36 2-hydroxymuconate tautomerase (EC 5.3.2.6) from Comamonas testosteroni CNB-1 (see paper)
    33% identity, 90% coverage of query (43.9 bits)

xylH / Q01468 4-oxalocrotonate tautomerase subunit (EC 5.3.2.6) from Pseudomonas putida (see 4 papers)
4OT1_PSEPU / Q01468 2-hydroxymuconate tautomerase; 4-oxalocrotonate tautomerase; 4-OT; EC 5.3.2.6 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 2 papers)
Q01468 2-hydroxymuconate tautomerase (EC 5.3.2.6) from Pseudomonas putida (see 3 papers)
xylH / AAA25694.1 4-oxalocrotonate tautomerase from Pseudomonas putida (see paper)
    34% identity, 97% coverage of query (42.7 bits)

Build an alignment

Build an alignment for BPHYT_RS24200 and 5 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory