Searching for up to 100 curated homologs for BPHYT_RS30855 FitnessBrowser__BFirm:BPHYT_RS30855 (362 a.a.)

Found high-coverage hits (≥70%) to 15 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

XYLF_SULAC / Q4J710 Xylose/arabinose-binding protein XylF; D-xylose/L-arabinose substrate binding protein; SBP from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) (see paper)
Q4J710 ABC-type D-xylose/L-arabinose transporter (subunit 1/2) (EC 7.5.2.13) from Sulfolobus acidocaldarius (see paper)
    55% identity, 84% coverage of query (324 bits)

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Build an alignment for BPHYT_RS30855 and 1 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

7x0hA / A3DCF2 Crystal structure of sugar binding protein cbpa complexed wtih glucose from clostridium thermocellum (see paper)
    26% identity, 80% coverage of query (89.0 bits)

5hqjA / B1G1H7 Crystal structure of abc transporter solute binding protein b1g1h7 from burkholderia graminis c4d1m, target efi-511179, in complex with d-arabinose
    27% identity, 75% coverage of query (85.5 bits)

6gt9A / W8QN64 Crystal structure of ganp, a glucose-galactose binding protein from geobacillus stearothermophilus, in complex with galactose
    27% identity, 77% coverage of query (82.4 bits)

6guqA Crystal structure of ganp, a glucose-galactose binding protein from geobacillus stearothermophilus, in complex with glucose
    27% identity, 77% coverage of query (82.0 bits)

2h3hA / Q9WXW9 Crystal structure of the liganded form of thermotoga maritima glucose binding protein (see paper)
    27% identity, 76% coverage of query (80.1 bits)

3c6qC Apo and ligand-bound form of a thermophilic glucose/xylose binding protein
    27% identity, 76% coverage of query (80.1 bits)

5dkvA / B9K0T2 Crystal structure of an abc transporter solute binding protein from agrobacterium vitis(avis_5339, target efi-511225) bound with alpha-d- tagatopyranose
    26% identity, 79% coverage of query (78.6 bits)

TC 3.A.1.2.20 / G4FGN5 LacI family transcriptional regulator, component of Glucose porter. Also bind xylose (Boucher and Noll 2011). Induced by glucose (Frock et al. 2012). Directly regulated by glucose-responsive regulator GluR from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
    26% identity, 78% coverage of query (77.8 bits)

PGA1_c07300 Inositol transport system sugar-binding protein from Phaeobacter inhibens BS107
    24% identity, 81% coverage of query (72.0 bits)

HSERO_RS05260 ABC transporter for L-fucose, substrate-binding component from Herbaspirillum seropedicae SmR1
    26% identity, 86% coverage of query (53.1 bits)

2ioyA / Q8RD41 Crystal structure of thermoanaerobacter tengcongensis ribose binding protein (see paper)
    27% identity, 75% coverage of query (50.8 bits)

4rxtA / B9JKX8 Crystal structure of carbohydrate transporter solute binding protein arad_9553 from agrobacterium radiobacter, target efi-511541, in complex with d-arabinose
    25% identity, 76% coverage of query (50.1 bits)

4irxA / A0A0H3C834 Crystal structure of caulobacter myo-inositol binding protein bound to myo-inositol (see paper)
    21% identity, 74% coverage of query (48.1 bits)

7e7mC / Q8E283 Crystal structure analysis of the streptococcus agalactiae ribose binding protein rbsb
    25% identity, 76% coverage of query (43.5 bits)

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