Searching for up to 100 curated homologs for BT4313 (89 a.a.)
Found high-coverage hits (≥70%) to 41 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
RK27_SPIOL / P82190 Large ribosomal subunit protein bL27c; 50S ribosomal protein L27, chloroplastic; CL27 from Spinacia oleracea (Spinach) (see 2 papers)
63% identity, 94% coverage of query (115 bits)
8rd8VH / A0A0M4TUE5 8rd8VH (see paper)
68% identity, 90% coverage of query (112 bits)
RK27_ARATH / Q9FLN4 Large ribosomal subunit protein bL27c; 50S ribosomal protein L27, chloroplastic; CL27 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
60% identity, 94% coverage of query (110 bits)
6eriAW / P82190 6eriAW (see paper)
62% identity, 92% coverage of query (110 bits)
4v61BX 4v61BX (see paper)
60% identity, 94% coverage of query (108 bits)
RL27_DEIRA / Q9RY65 Large ribosomal subunit protein bL27; 50S ribosomal protein L27 from Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1) (see 6 papers)
62% identity, 100% coverage of query (108 bits)
RL27_THET8 / P60493 Large ribosomal subunit protein bL27; 50S ribosomal protein L27 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see paper)
5a9zAX / P60493 of Thermous thermophilus ribosome bound to BipA-GDPCP (see paper)
60% identity, 93% coverage of query (107 bits)
7uvvV / B7I6V8 7uvvV (see paper)
64% identity, 90% coverage of query (107 bits)
5aa0AX of Thermous thermophilus ribosome (A-and P-site tRNA) bound to BipA-GDPCP
60% identity, 93% coverage of query (107 bits)
Rpz / b3185 50S ribosomal subunit protein L27 from Escherichia coli K-12 substr. MG1655 (see 32 papers)
rpmA / P0A7L8 50S ribosomal subunit protein L27 from Escherichia coli (strain K12) (see 28 papers)
RL27_ECOLI / P0A7L8 Large ribosomal subunit protein bL27; 50S ribosomal protein L27 from Escherichia coli (strain K12) (see 12 papers)
rpmA / BAA02526.1 ribosomal protein L27 from Escherichia coli (see 2 papers)
63% identity, 91% coverage of query (106 bits)
4v4gBX 4v4gBX (see paper)
63% identity, 94% coverage of query (105 bits)
8cd1W / Q9HVL7 8cd1W (see paper)
66% identity, 84% coverage of query (105 bits)
1vy4B0 50S ribosomal protein L36
59% identity, 92% coverage of query (105 bits)
7unrY 30S ribosomal protein S6
66% identity, 84% coverage of query (105 bits)
8a3lv / P0A7L8 8a3lv (see paper)
63% identity, 90% coverage of query (103 bits)
7jilW / A0A1M6R2K9 7jilW (see paper)
66% identity, 83% coverage of query (102 bits)
8v9kY / A0R150 8v9kY (see paper)
60% identity, 92% coverage of query (98.6 bits)
4v85B0 50S ribosomal protein L17
63% identity, 83% coverage of query (97.4 bits)
RL27_BACSU / P05657 Large ribosomal subunit protein bL27; 50S ribosomal protein L27; BL24; BL30 from Bacillus subtilis (strain 168) (see 2 papers)
57% identity, 93% coverage of query (95.1 bits)
8qcqW / P05657 8qcqW (see paper)
57% identity, 92% coverage of query (95.1 bits)
8fmwAY / O51721 8fmwAY (see paper)
63% identity, 84% coverage of query (94.0 bits)
4v8eA3 structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).
56% identity, 83% coverage of query (92.0 bits)
8p8wu / P75458 8p8wu (see paper)
60% identity, 79% coverage of query (89.4 bits)
RL27_STAA8 / Q2FXT0 Large ribosomal subunit protein bL27; 50S ribosomal protein L27 from Staphylococcus aureus (strain NCTC 8325 / PS 47) (see 2 papers)
54% identity, 91% coverage of query (88.6 bits)
6xywAw / Q9ZVX0 6xywAw (see paper)
56% identity, 83% coverage of query (87.8 bits)
7mt2W / P9WHB3 7mt2W (see paper)
56% identity, 87% coverage of query (86.3 bits)
6o8wX / A0A1B4XMB1 6o8wX (see paper)
50% identity, 85% coverage of query (80.9 bits)
5myjBZ / A2RLA2 of 70S ribosome from Lactococcus lactis (see paper)
52% identity, 84% coverage of query (80.5 bits)
9c4gv / A0A2B7IGT1 Cutibacterium acnes 50s ribosomal subunit with clindamycin bound (see paper)
58% identity, 87% coverage of query (79.7 bits)
5nrgT / Q2FXT0 The crystal structure of the large ribosomal subunit of staphylococcus aureus in complex with rb02 (see paper)
54% identity, 80% coverage of query (78.2 bits)
8uu4Y / A0A660JMC7 8uu4Y (see paper)
49% identity, 84% coverage of query (76.6 bits)
RM02_YEAST / P12687 Large ribosomal subunit protein bL27m; 54S ribosomal protein L2, mitochondrial; YMR6; YmL2 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 7 papers)
49% identity, 76% coverage of query (74.7 bits)
6z1pAA / I7M068 6z1pAA (see paper)
44% identity, 82% coverage of query (66.6 bits)
RM02_NEUCR / Q1K730 Large ribosomal subunit protein bL27m from Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (see 2 papers)
46% identity, 72% coverage of query (63.9 bits)
6yweR / Q8X0Q2 structure of the mitoribosome from Neurospora crassa in the P/E tRNA bound state (see paper)
46% identity, 73% coverage of query (62.8 bits)
4ce40 / A0A4X1U0F6 39s large subunit of the porcine mitochondrial ribosome (see paper)
39% identity, 84% coverage of query (58.2 bits)
RM27_BOVIN / Q32PC3 Large ribosomal subunit protein bL27m; 39S ribosomal protein L27, mitochondrial; L27mt; MRP-L27 from Bos taurus (Bovine) (see 2 papers)
45% identity, 76% coverage of query (57.8 bits)
RM27_HUMAN / Q9P0M9 Large ribosomal subunit protein bL27m; 39S ribosomal protein L27, mitochondrial; L27mt; MRP-L27 from Homo sapiens (Human) (see 5 papers)
46% identity, 76% coverage of query (57.0 bits)
8anyW / Q9P0M9 8anyW (see paper)
46% identity, 74% coverage of query (55.8 bits)
8a22Au 8a22Au (see paper)
41% identity, 81% coverage of query (53.9 bits)
RM27_MOUSE / Q99N92 Large ribosomal subunit protein bL27m; 39S ribosomal protein L27, mitochondrial; L27mt; MRP-L27 from Mus musculus (Mouse) (see paper)
43% identity, 76% coverage of query (53.5 bits)
Build an alignment for BT4313 and 41 homologs with ≥ 30% identity
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Lawrence Berkeley National Laboratory