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Searching for up to 100 curated homologs for BWI76_RS00680 FitnessBrowser__Koxy:BWI76_RS00680 (488 a.a.)

Found high-coverage hits (≥70%) to 12 curated proteins.

Removed hits that are identical to the query, leaving 11

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

RhaB / b3904 rhamnulokinase (EC 2.7.1.5) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
rhaB / P32171 rhamnulokinase (EC 2.7.1.5) from Escherichia coli (strain K12) (see 5 papers)
RHAB_ECOLI / P32171 L-Rhamnulokinase; RhaB; RhuK; ATP:L-rhamnulose phosphotransferase; L-rhamnulose 1-kinase; Rhamnulose kinase; EC 2.7.1.5 from Escherichia coli (strain K12) (see 6 papers)
    78% identity, 100% coverage of query (789 bits)

RHAB_ECOUT / Q1R415 Rhamnulokinase; Rhamnulose kinase; EC 2.7.1.5 from Escherichia coli (strain UTI89 / UPEC) (see paper)
    78% identity, 100% coverage of query (788 bits)

2cgjA / P32171 Crystal structure of l-rhamnulose kinase from escherichia coli in complex with l-fructose and adp. (see paper)
    78% identity, 97% coverage of query (773 bits)

2uytA Structure of l-rhamnulose kinase in complex with adp and beta-l- rhamnulose.
    78% identity, 97% coverage of query (773 bits)

2cglA Crystal structure of l-rhamnulose kinase from escherichia coli in complex with l-fructose, adp and a modeled atp gamma phosphate.
    78% identity, 97% coverage of query (773 bits)

BT1275 L-fuculose kinase fucK (EC 2.7.1.51); D-ribulose kinase (EC 2.7.1.47) from Bacteroides thetaiotaomicron VPI-5482
    40% identity, 94% coverage of query (329 bits)

Build an alignment

Build an alignment for BWI76_RS00680 and 6 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Additional hits (identity < 30%)

FucK / b2803 L-fuculokinase (EC 2.7.1.51) from Escherichia coli K-12 substr. MG1655 (see 7 papers)
fucK / P11553 L-fuculokinase (EC 2.7.1.51) from Escherichia coli (strain K12) (see 6 papers)
FUCK_ECOLI / P11553 L-fuculokinase; L-fuculose kinase; EC 2.7.1.51 from Escherichia coli (strain K12) (see 3 papers)
    28% identity, 82% coverage of query (110 bits)

BWI76_RS22930 L-fuculokinase (EC 2.7.1.51) from Klebsiella michiganensis M5al
    26% identity, 86% coverage of query (100 bits)

P74260 glycerol kinase (EC 2.7.1.30) from Synechocystis sp. PCC 6803 (see paper)
    24% identity, 86% coverage of query (62.8 bits)

GLPK_ARATH / Q9M8L4 Glycerol kinase; Glycerokinase; ATP:glycerol 3-phosphotransferase; Protein GLYCEROL INSENSITIVE 1; Protein NONHOST RESISTANCE TO P. S. PHASEOLICOLA 1; EC 2.7.1.30 from Arabidopsis thaliana (Mouse-ear cress) (see 5 papers)
    24% identity, 77% coverage of query (55.5 bits)

Q9WXX1 xylulokinase (EC 2.7.1.17) from Thermotoga maritima (see paper)
    21% identity, 73% coverage of query (55.5 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory