Searching for up to 100 curated homologs for BWI76_RS04045 FitnessBrowser__Koxy:BWI76_RS04045 (447 a.a.)

Found high-coverage hits (≥70%) to 17 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

TC 4.A.3.2.6 / Q9KSH4 VC_1282 aka IIC, component of Glucosamine β(1→4) glucosamine (GlcN)2 (glucosamine dimer) transporter, VC1281-1283 (IIB; IIC; IIA, respectively) from Vibrio cholerae (see paper)
    52% identity, 98% coverage of query (462 bits)

TC 4.A.3.2.3 / O50980 ChbC, component of N,N'-diacetylchitobiose porter, ChbABC from Borrelia burgdorferi (Lyme disease spirochete) (see paper)
    39% identity, 94% coverage of query (332 bits)

TC 4.A.3.2.8 / Q72XQ0 PTS system, cellobiose-specific IIC component, component of N-, N'-diacetylchitobiose PTS permease, IIABCChb from Bacillus cereus (strain ATCC 10987)
    36% identity, 95% coverage of query (260 bits)

TC 4.A.3.2.2 / P46317 PTCC aka LicC aka CELB, component of Lichenan oligosaccharide (Lic) porter from Bacillus subtilis (see 3 papers)
    34% identity, 95% coverage of query (260 bits)

3qnqD / Q72XQ0 Crystal structure of the transporter chbc, the iic component from the n,n'-diacetylchitobiose-specific phosphotransferase system (see paper)
    35% identity, 93% coverage of query (253 bits)

PTLCB_STAAU / P11162 PTS system lactose-specific EIICB component; EIICB-Lac; EII-Lac; EC 2.7.1.207 from Staphylococcus aureus (see 7 papers)
TC 4.A.3.1.1 / P11162 PtlB aka LACE, component of Lactose (Lac) porter, LacEF from Staphylococcus aureus (see paper)
    33% identity, 96% coverage of query (240 bits)

PTLCB_LACLL / P23531 PTS system lactose-specific EIICB component; EIICB-Lac; EII-Lac; EC 2.7.1.207 from Lactococcus lactis subsp. lactis (Streptococcus lactis) (see paper)
    33% identity, 96% coverage of query (234 bits)

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Build an alignment for BWI76_RS04045 and 7 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

TC 4.A.3.1.3 / Q045H3 PTS system lactose-specific IIB component, Lac family / PTS system lactose-specific IIC component, Lac family, component of Lactose PTS group translocator #2, IIA/IICB from Lactobacillus gasseri (strain ATCC 33323 / DSM 20243)
    29% identity, 96% coverage of query (219 bits)

PTEC_BACSU / O05507 PTS system oligo-beta-mannoside-specific EIIC component; Glucomannan utilization protein C; Oligo-beta-mannoside permease IIC component from Bacillus subtilis (strain 168) (see paper)
    31% identity, 98% coverage of query (218 bits)

PTLCB_LACCA / P24400 PTS system lactose-specific EIICB component; EIICB-Lac; EII-Lac; EC 2.7.1.207 from Lacticaseibacillus casei (Lactobacillus casei) (see paper)
    30% identity, 95% coverage of query (211 bits)

TC 4.A.3.1.2 / Q045X3 PTS system lactose-specific IIB component, Lac family / PTS system lactose-specific IIC component, Lac family, component of Lactose PTS group translocator #1, IIA/IICB from Lactobacillus gasseri (strain ATCC 33323 / DSM 20243)
    31% identity, 92% coverage of query (193 bits)

TC 4.A.3.2.9 / U5MFA1 PTS lactose transporter subunit IIC, component of PTS-type lactose transporter, IIC-IIB-IIA from Klebsiella pneumoniae CG43
    29% identity, 95% coverage of query (187 bits)

ChbC / b1737 N,N'-diacetylchitobiose-specific PTS enzyme IIC component (EC 2.7.1.196) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
ChbC / P17334 N,N'-diacetylchitobiose-specific PTS enzyme IIC component (EC 2.7.1.196) from Escherichia coli (strain K12) (see 2 papers)
PTQC_ECOLI / P17334 PTS system N,N'-diacetylchitobiose-specific EIIC component; EIIC-Chb; IIcel; N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIC component from Escherichia coli (strain K12) (see paper)
TC 4.A.3.2.1 / P17334 PTCC aka ChbC aka CELB aka B1737, component of N,N'-diacetylchitobiose (Chb) porter from Escherichia coli (see 8 papers)
    30% identity, 95% coverage of query (174 bits)

TC 4.A.3.2.7 / C4X745 PEP-dependent phosphotransferase enzyme II, component of N,N'-diacetylchitobiose (cellobiose) PTS permease, CelABC (IIABC) from Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044
    28% identity, 95% coverage of query (164 bits)

CELB_LACLA / Q9CJ32 PTS system cellobiose-specific EIIC component from Lactococcus lactis subsp. lactis (strain IL1403) (Streptococcus lactis) (see 2 papers)
TC 4.A.3.2.4 / Q9CJ32 CelB, component of The cellobiose-specific (PtcA-PtcB-CelB) porter (Kowalczyk et al., 2008 ) from Lactococcus lactis subsp. lactis (Streptococcus lactis) (see paper)
    27% identity, 94% coverage of query (164 bits)

Q8L3C2 protein-Npi-phosphohistidine-N,N'-diacetylchitobiose phosphotransferase (EC 2.7.1.196) from Serratia marcescens (see paper)
TC 4.A.3.2.5 / Q8L3C2 ChbC, component of The N,N' -diacetylchitobiose Enzyme II (Toratani et al., 2008) (>80% identical to the E. coli enzyme (4.A.3.2.1)) from Serratia marcescens (see paper)
    30% identity, 98% coverage of query (162 bits)

GPIIC_LACLM / A2RJV0 PTS system galactose-specific EIIC component from Lactococcus lactis subsp. cremoris (strain MG1363) (see paper)
    27% identity, 97% coverage of query (149 bits)

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