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Searching for up to 100 curated homologs for BWI76_RS13285 FitnessBrowser__Koxy:BWI76_RS13285 (206 a.a.)

Found high-coverage hits (≥70%) to 60 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

2buqA / P20371 Crystal structure of wild-type protocatechuate 3,4-dioxygenase from acinetobacter sp. Adp1 in complex with catechol (see paper)
    61% identity, 98% coverage of query (250 bits)

2buuA Crystal structure of protocatechuate 3,4-dioxygenase from acinetobacter sp. Adp1 mutant r457s in complex with 4-nitrocatechol
    61% identity, 98% coverage of query (250 bits)

pcaG / RF|YP_046376.1 protocatechuate 3,4-dioxygenase, alpha chain; EC 1.13.11.3 from Acinetobacter sp. ADP1 (see 3 papers)
    61% identity, 98% coverage of query (249 bits)

pcaG / AAC37154.1 protocatechuate 3,4-dioxygenase alpha subunit from Acinetobacter baylyi (see 11 papers)
    60% identity, 98% coverage of query (248 bits)

A0A193DXA9 protocatechuate 3,4-dioxygenase (subunit 2/2) (EC 1.13.11.3) from Rhizobium sp. LMB-1 (see paper)
    56% identity, 99% coverage of query (220 bits)

pcaG / AAF34267.1 protocatechuate 3,4-dioxygenase alpha chain from Agrobacterium tumefaciens (see 2 papers)
    55% identity, 99% coverage of query (216 bits)

A8I4B7 protocatechuate 3,4-dioxygenase (EC 1.13.11.3) from Chromohalobacter sp. (see paper)
    56% identity, 99% coverage of query (199 bits)

pcaG / P00436 protocatechuate 3,4-dioxygenase α subunit (EC 1.13.11.3) from Pseudomonas putida (see paper)
pcaG / AAB41025.1 protocatechuate 3,4-dioxygenase, alpha subunit from Pseudomonas putida (see paper)
    51% identity, 99% coverage of query (195 bits)

3lxvA / P00436 Tyrosine 447 of protocatechuate 3,4-dioxygenase controls efficient progress through catalysis
    51% identity, 99% coverage of query (195 bits)

4whsC 4-fluorocatechol bound to protocatechuate 3,4-dioxygenase (pseudomonas putida) at ph 8.5
    51% identity, 99% coverage of query (195 bits)

4whrA Anhydride reaction intermediate trapped in protocatechuate 3,4- dioxygenase (pseudomonas putida) at ph 8.5
    51% identity, 99% coverage of query (195 bits)

4whqA Alkylperoxo reaction intermediate trapped in protocatechuate 3,4- dioxygenase (pseudomonas putida) at ph 6.5
    51% identity, 99% coverage of query (195 bits)

4whoA Resting protocatechuate 3,4-dioxygenase (pseudomonas putida) at ph 8.5
    51% identity, 99% coverage of query (195 bits)

3pcmF Structure of protocatechuate 3,4-dioxygenase complexed with 6- hydroxynicotinic acid n-oxide and cyanide
    51% identity, 99% coverage of query (195 bits)

3pclA Structure of protocatechuate 3,4-dioxygenase complexed with 2- hydroxyisonicotinic acid n-oxide and cyanide
    51% identity, 99% coverage of query (195 bits)

3pciA Structure of protocatechuate 3,4-dioxygenase complexed with 3-iodo-4- hydroxybenzoate
    51% identity, 99% coverage of query (195 bits)

3pchA Structure of protocatechuate 3,4-dioxygenase complexed with 3-chloro- 4-hydroxybenzoate
    51% identity, 99% coverage of query (195 bits)

3pcgC Structure of protocatechuate 3,4-dioxygenase complexed with the inhibitor 4-hydroxyphenylacetate
    51% identity, 99% coverage of query (195 bits)

3pcfA Structure of protocatechuate 3,4-dioxygenase complexed with 3-fluro-4- hydroxybenzoate
    51% identity, 99% coverage of query (195 bits)

3pceC Structure of protocatechuate 3,4-dioxygenase complexed with 3- hydroxyphenylacetate
    51% identity, 99% coverage of query (195 bits)

3pcbF Structure of protocatechuate 3,4-dioxygenase complexed with 3- hydroxybenzoate
    51% identity, 99% coverage of query (195 bits)

3mi5A Axial ligand swapping in double mutant maintains intradiol-cleavage chemistry in protocatechuate 3,4-dioxygenase
    51% identity, 99% coverage of query (195 bits)

3mflA Axial ligand swapping in double mutant maintains intradiol-cleavage chemistry in protocatechuate 3,4-dioxygenase
    51% identity, 99% coverage of query (195 bits)

3lxvB Tyrosine 447 of protocatechuate 3,4-dioxygenase controls efficient progress through catalysis
    51% identity, 99% coverage of query (195 bits)

I0DHJ0 protocatechuate 3,4-dioxygenase (subunit 2/2) (EC 1.13.11.3) from Stenotrophomonas maltophilia (see 2 papers)
    50% identity, 99% coverage of query (193 bits)

pcaG2 / Q93PS1 protocatechuate 3,4-dioxygenase type II α subunit (EC 1.13.11.3) from Hydrogenophaga intermedia (see 4 papers)
    42% identity, 97% coverage of query (146 bits)

Q0SH26 protocatechuate 3,4-dioxygenase (subunit 1/2) (EC 1.13.11.3) from Rhodococcus jostii (see paper)
    40% identity, 97% coverage of query (129 bits)

pcaG / AAC38244.1 protocatechuate dioxygenase alpha subunit from Rhodococcus opacus (see paper)
    40% identity, 97% coverage of query (129 bits)

3pckM Structure of protocatechuate 3,4-dioxygenase complexed with 6- hydroxynicotinic acid n-oxide
    35% identity, 97% coverage of query (105 bits)

3pcjM Structure of protocatechuate 3,4-dioxygenase complexed with 2- hydroxyisonicotinic acid n-oxide
    35% identity, 97% coverage of query (105 bits)

3pciM Structure of protocatechuate 3,4-dioxygenase complexed with 3-iodo-4- hydroxybenzoate
    35% identity, 97% coverage of query (105 bits)

3pchM Structure of protocatechuate 3,4-dioxygenase complexed with 3-chloro- 4-hydroxybenzoate
    35% identity, 97% coverage of query (105 bits)

3pcgM Structure of protocatechuate 3,4-dioxygenase complexed with the inhibitor 4-hydroxyphenylacetate
    35% identity, 97% coverage of query (105 bits)

3pcfM Structure of protocatechuate 3,4-dioxygenase complexed with 3-fluro-4- hydroxybenzoate
    35% identity, 97% coverage of query (105 bits)

3pceM Structure of protocatechuate 3,4-dioxygenase complexed with 3- hydroxyphenylacetate
    35% identity, 97% coverage of query (105 bits)

3pcbM Structure of protocatechuate 3,4-dioxygenase complexed with 3- hydroxybenzoate
    35% identity, 97% coverage of query (105 bits)

pcaH / P00437 protocatechuate 3,4-dioxygenase β subunit (EC 1.13.11.3) from Pseudomonas putida (see paper)
pcaH / AAB41024.1 protocatechuate 3,4-dioxygenase, beta subunit from Pseudomonas putida (see paper)
    35% identity, 97% coverage of query (102 bits)

P00437 Protocatechuate 3,4-dioxygenase beta chain; 3,4-PCD; EC 1.13.11.3 from Pseudomonas putida (Arthrobacter siderocapsulatus)
    35% identity, 97% coverage of query (102 bits)

4whqF Alkylperoxo reaction intermediate trapped in protocatechuate 3,4- dioxygenase (pseudomonas putida) at ph 6.5
    35% identity, 97% coverage of query (102 bits)

4whrB Anhydride reaction intermediate trapped in protocatechuate 3,4- dioxygenase (pseudomonas putida) at ph 8.5
    35% identity, 97% coverage of query (102 bits)

4whqB Alkylperoxo reaction intermediate trapped in protocatechuate 3,4- dioxygenase (pseudomonas putida) at ph 6.5
    35% identity, 97% coverage of query (102 bits)

I0DHJ1 protocatechuate 3,4-dioxygenase (subunit 1/2) (EC 1.13.11.3) from Stenotrophomonas maltophilia (see 2 papers)
    35% identity, 97% coverage of query (101 bits)

3lktM / P00437 Tyrosine 447 of protocatechuate 3,4-dioxygenase controls efficient progress through catalysis
    35% identity, 97% coverage of query (101 bits)

3lxvM Tyrosine 447 of protocatechuate 3,4-dioxygenase controls efficient progress through catalysis
    35% identity, 97% coverage of query (101 bits)

3mv4M Axial ligand swapping in double mutant maintains intradiol-cleavage chemistry in protocatechuate 3,4-dioxygenase
    35% identity, 97% coverage of query (100 bits)

3mi5M Axial ligand swapping in double mutant maintains intradiol-cleavage chemistry in protocatechuate 3,4-dioxygenase
    35% identity, 97% coverage of query (100 bits)

3mflM Axial ligand swapping in double mutant maintains intradiol-cleavage chemistry in protocatechuate 3,4-dioxygenase
    35% identity, 97% coverage of query (100 bits)

pcaH / AAC38243.1 protocatechuate dioxygenase beta subunit from Rhodococcus opacus (see paper)
    36% identity, 79% coverage of query (95.5 bits)

2bumB / P20372 Crystal structure of wild-type protocatechuate 3,4-dioxygenase from acinetobacter sp. Adp1 (see paper)
    37% identity, 77% coverage of query (94.4 bits)

pcaH / RF|YP_046375.1 protocatechuate 3,4-dioxygenase, beta chain; EC 1.13.11.3 from Acinetobacter sp. ADP1 (see 3 papers)
pcaH / AAC37153.1 protocatechuate 3,4-dioxygenase beta subunit from Acinetobacter baylyi (see 11 papers)
    37% identity, 77% coverage of query (94.4 bits)

Q0SH27 protocatechuate 3,4-dioxygenase (subunit 2/2) (EC 1.13.11.3) from Rhodococcus jostii (see paper)
    36% identity, 79% coverage of query (94.4 bits)

2buqB Crystal structure of wild-type protocatechuate 3,4-dioxygenase from acinetobacter sp. Adp1 in complex with catechol
    37% identity, 77% coverage of query (94.4 bits)

1eocB Crystal structure of acinetobacter sp. Adp1 protocatechuate 3,4- dioxygenase in complex with 4-nitrocatechol
    37% identity, 77% coverage of query (94.4 bits)

1eoaB Crystal structure of acinetobacter sp. Adp1 protocatechuate 3,4- dioxygenase in complex with cyanide
    37% identity, 77% coverage of query (94.4 bits)

1eo9B Crystal structure of acinetobacter sp. Adp1 protocatechuate 3,4- dioxygenase at ph < 7.0
    37% identity, 77% coverage of query (94.4 bits)

A8I4B3 protocatechuate 3,4-dioxygenase (EC 1.13.11.3) from Chromohalobacter sp. (see paper)
    36% identity, 77% coverage of query (85.1 bits)

pcaH2 / Q93PS2 protocatechuate 3,4-dioxygenase type II β subunit (EC 1.13.11.3) from Hydrogenophaga intermedia (see 4 papers)
    35% identity, 76% coverage of query (84.3 bits)

A0A193DXP2 protocatechuate 3,4-dioxygenase (subunit 1/2) (EC 1.13.11.3) from Rhizobium sp. LMB-1 (see paper)
    34% identity, 77% coverage of query (79.3 bits)

pcaH / AAF34268.1 protocatechuate 3,4-dioxygenase beta chain from Agrobacterium tumefaciens (see 2 papers)
    34% identity, 77% coverage of query (78.2 bits)

pnpC / AAS87586.1 benzenetriol dioxygenase from Ralstonia sp. SJ98 (see paper)
    30% identity, 74% coverage of query (50.1 bits)

Build an alignment

Build an alignment for BWI76_RS13285 and 60 homologs with ≥ 30% identity

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory