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Searching for up to 100 curated homologs for BWI76_RS16945 FitnessBrowser__Koxy:BWI76_RS16945 (617 a.a.)

Found high-coverage hits (≥70%) to 4 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

DSD_PSEPK / Q88JU3 3-dehydroshikimate dehydratase; DSD; EC 4.2.1.118 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
    52% identity, 100% coverage of query (628 bits)

5hmqD / Q88JU3 Xylose isomerase-like tim barrel/4-hydroxyphenylpyruvate dioxygenase fusion protein
    53% identity, 100% coverage of query (615 bits)

DSD_PSEAE / Q9I6P6 3-dehydroshikimate dehydratase; DSD; EC 4.2.1.118 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
    54% identity, 100% coverage of query (607 bits)

qsuB / A4QB63 dehydroshikimate dehydratase (EC 4.2.1.118) from Corynebacterium glutamicum (strain R) (see paper)
    41% identity, 100% coverage of query (399 bits)

Build an alignment

Build an alignment for BWI76_RS16945 and 4 homologs with ≥ 30% identity

Select sequences

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory