Searching for up to 100 curated homologs for BWI76_RS17225 FitnessBrowser__Koxy:BWI76_RS17225 (337 a.a.)
Found high-coverage hits (≥70%) to 100 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
OppD / b1246 murein tripeptide ABC transporter / oligopeptide ABC transporter ATP binding subunit OppD (EC 7.4.2.6) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
oppD / P76027 murein tripeptide ABC transporter / oligopeptide ABC transporter ATP binding subunit OppD (EC 7.4.2.6) from Escherichia coli (strain K12) (see 2 papers)
TC 3.A.1.5.41 / P76027 Oligopeptide transport ATP-binding protein OppD, component of Oligopeptide transporter, OppABCDF/MppA/YgiS from Escherichia coli (strain K12)
oppD oligopeptide ABC transporter, ATP-binding protein OppD from Escherichia coli K12 (see paper)
91% identity, 100% coverage of query (638 bits)
TC 3.A.1.5.1 / P04285 OppD aka STM1743, component of Oligopeptide porter (also takes up amino glycoside antibiotics such as kanamycin, streptomycin and neomycin as well as cell wall-derived peptides such as murein tripeptide). It transports substrate peptides of 2-5 amino acids with highest affinity for tripeptides. Also transports δ-aminolevulinic acid (ALA). [May be regulated by PTS Enzyme INtr-aspartokinase.] ATP-binding to OppDF may result in donation of peptide to OppBC and simultaneous release of OppA from Salmonella typhimurium (see 3 papers)
90% identity, 100% coverage of query (626 bits)
Q5V9R9 ABC-type oligopeptide transporter (EC 7.4.2.6) from Vibrio fluvialis (see paper)
TC 3.A.1.5.22 / Q5V9R9 OppD, component of The peptide transporter OppA,B,C,D,F (influences biofilm formation; Lee et al., 2004). Similar to 3.A.1.5.1, OppA is similar to the Vibrio furnissii OppA that provides several functions: hemolysis, antibiotic resistance, and virulence from Vibrio fluvialis (see paper)
79% identity, 93% coverage of query (512 bits)
TC 3.A.1.5.37 / B1W1L9 Putative peptide ABC transporter ATP-binding protein, component of The ABC BldKA-E (SGR_2418-2414) oligopeptide transport system. It controls aerial mycelium formation on glucose media. Probably involved in extracellular peptide signalling (Akanuma et al. 2011). Probably orthologous to 3.A.1.5.35 from Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)
54% identity, 90% coverage of query (337 bits)
TC 3.A.1.5.15 / Q9X271 TM1749, component of Probable mannose/mannoside porter. Induced by beta-mannan (Conners et al., 2005). Regulated by mannose-responsive regulator manR (see paper)
52% identity, 92% coverage of query (330 bits)
TC 3.A.1.5.2 / P26905 DppD aka DCIAD, component of Dipeptide porter. Also transports δ-aminolevulinic acid (ALA) and heme from Bacillus subtilis (see 2 papers)
52% identity, 89% coverage of query (327 bits)
TC 3.A.1.5.25 / Q9CIK9 Oligopeptide ABC trasporter ATP binding protein, component of The ABC peptide/signalling peptide transporter. OptA binds peptides of 3-6 aas; OptS binds dipeptides. OptB,C,D are most similar to 3.A.1.5.19 from Lactococcus lactis subsp. lactis (see paper)
51% identity, 93% coverage of query (325 bits)
DPPD_LACLM / A2RI77 Dipeptide transport ATP-binding protein DppD; EC 7.4.2.9 from Lactococcus lactis subsp. cremoris (strain MG1363) (see paper)
50% identity, 93% coverage of query (323 bits)
TC 3.A.1.5.19 / Q2FZR5 OppD, component of The major oligopeptide uptake porter, Opp-3 (of four paralogues, this is the only one that mediates nitrogen nutrition from Staphylococcus aureus (strain NCTC 8325)
52% identity, 93% coverage of query (319 bits)
OPPD_BACSU / P24136 Oligopeptide transport ATP-binding protein OppD; Stage 0 sporulation protein KD from Bacillus subtilis (strain 168) (see paper)
53% identity, 89% coverage of query (317 bits)
TC 3.A.1.5.36 / Q93IU0 BldKD, putative ABC transporter intracellular ATPase subunit, component of Peptide transporter encoded adjacent to the putative transport system with TC#3.A.1.5.35 (Akanuma et al. 2011). Induced by exogenous S-adenosylmethionine (SAM) at a concentration of 2muM which also enhanced antibiotic production and inhibited morphological development (Park et al. 2005). SAM can be imported into cells. Mutants in the bldK genes confer resistance to the toxic tripeptide, bialaphos from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
51% identity, 92% coverage of query (315 bits)
TC 3.A.1.5.20 / P42064 AppD, component of 5-6 amino acyl oligopeptide transporter AppA-F from Bacillus subtilis (see 2 papers)
48% identity, 93% coverage of query (308 bits)
DppD / b3541 dipeptide ABC transporter ATP binding subunit DppD (EC 7.4.2.9) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
dppD / P0AAG0 dipeptide ABC transporter ATP binding subunit DppD (EC 7.4.2.9) from Escherichia coli (strain K12) (see 4 papers)
DPPD_ECOLI / P0AAG0 Dipeptide transport ATP-binding protein DppD; EC 7.4.2.9 from Escherichia coli (strain K12) (see 3 papers)
dppD / RF|NP_417998 dipeptide transport ATP-binding protein dppD from Escherichia coli K12 (see paper)
46% identity, 94% coverage of query (296 bits)
TC 3.A.1.5.12 / Q9X0F4 TM1064, component of Probable rhamnose oligosaccharide porter. Induced by rhamnose (see paper)
46% identity, 93% coverage of query (290 bits)
TC 3.A.1.5.27 / P45095 Dipeptide transport ATP-binding protein DppD, component of The glutathione uptake porter, DppBCDF with the glutathione binding protein, DppA (GbpA; HbpA). Takes up reduced (GSH) and oxidized (GSSG) but not bulky glutathione S conjugates or glutathione derivatives with C-terminal modifications from Haemophilus influenzae (see 2 papers)
46% identity, 94% coverage of query (285 bits)
DdpD / b1484 putative D,D-dipeptide ABC transporter ATP-binding subunit DdpD from Escherichia coli K-12 substr. MG1655 (see paper)
DDPD_ECOLI / P77268 Probable D,D-dipeptide transport ATP-binding protein DdpD from Escherichia coli (strain K12) (see paper)
44% identity, 95% coverage of query (284 bits)
TC 3.A.1.5.29 / Q9WXR4 Oligopeptide ABC transporter, ATP-binding protein, component of Probable xylan oligosaccharide porter (Conners et al. 2005). Induced by cylan and xylose. Regulated by xylose-responsive regulator XylR from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
45% identity, 93% coverage of query (279 bits)
TC 3.A.1.5.26 / P63395 Uncharacterized ABC transporter ATP-binding protein Rv1281c/MT1318, component of The glutathione transporter, OppA (Dasgupta et al., 2010). OppA binds glutathione and the nanopeptide, bradykinin. Also regulates cytokine release, apoptosis and the innate immune response of macrophages infected with M. tuberculosis from Mycobacterium tuberculosis (see 2 papers)
46% identity, 93% coverage of query (277 bits)
DPPD_PSEAB / A0A0H2ZGN6 Di/tripeptide transport ATP-binding protein DppD; EC 7.4.2.9 from Pseudomonas aeruginosa (strain UCBPP-PA14) (see paper)
TC 3.A.1.5.39 / W0WJ90 Dipeptide transport ATP-binding protein DppD, component of Di- and tri-peptide transporter, DppBCDF with periplasmic substrate binding receptors, A1, A3, A5, A7 and A9, each with differing specificities for peptides from Pseudomonas aeruginosa MH38
47% identity, 93% coverage of query (274 bits)
A0A150QXP6 5-(carboxyamino)imidazole ribonucleotide mutase (EC 5.4.99.18) from Bacillus anthracis (see paper)
43% identity, 92% coverage of query (273 bits)
TC 3.A.1.5.32 / F0TFT0 Oligopeptide ABC transporter, component of ABC α-galactoside uptake porter from Lactobacillus acidophilus (strain 30SC)
42% identity, 94% coverage of query (268 bits)
GsiA / b0829 glutathione ABC transporter ATP binding subunit GsiA (EC 7.4.2.10) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
gsiA / P75796 glutathione ABC transporter ATP binding subunit GsiA (EC 7.4.2.10) from Escherichia coli (strain K12) (see 3 papers)
GSIA_ECOLI / P75796 Glutathione import ATP-binding protein GsiA; EC 7.4.2.10 from Escherichia coli (strain K12) (see paper)
P75796 ABC-type glutathione transporter (EC 7.4.2.10) from Escherichia coli (see paper)
TC 3.A.1.5.11 / P75796 Hypothetical ABC transporter ATP-binding protein yliA, component of Glutathione porter, YliABCD or GsiABCD from Escherichia coli (see 4 papers)
50% identity, 78% coverage of query (263 bits)
TC 3.A.1.5.18 / O31309 OppD, component of The oligopeptide transporter OppA1-5, B1, C1, DF (functions with five binding proteins of differing induction properties and peptide specificities; OppA1-3 are chromosomally encoded; OppA4 and 5 are plasmid encoded.) from Borrelia burgdorferi (Lyme disease spirochete) (see 2 papers)
49% identity, 80% coverage of query (263 bits)
Q8ZQM4 ABC-type glutathione transporter (EC 7.4.2.10) from Salmonella enterica subsp. enterica serovar Typhimurium (see paper)
51% identity, 77% coverage of query (262 bits)
Q73NS7 ABC-type dipeptide transporter (EC 7.4.2.9) from Treponema denticola (see paper)
46% identity, 94% coverage of query (258 bits)
TC 3.A.1.5.23 / Q9F9T4 EppD, component of The Ethylene diamine tetraacetate (EDTA) uptake porter, EppABCD (see 2 papers)
46% identity, 78% coverage of query (243 bits)
SM_b21644 ABC transporter for D-Raffinose, ATPase component from Sinorhizobium meliloti 1021
45% identity, 85% coverage of query (242 bits)
TC 3.A.1.5.4 / O30541 AccB, component of Agrocinopine (an opine)/Agrocin 84 (an antibiotic) porter from Agrobacterium radiobacter (see 3 papers)
42% identity, 93% coverage of query (241 bits)
TC 3.A.1.5.10 / Q07733 OppD, component of Oligopeptide porter (transports peptides of 4-35) amino acyl residues; di- and tripeptides are not transported; hydrophobic basic peptides are preferred). OppA determines the specificity of the system (Doeven et al., 2004). A large cavity in OppA binds proline-rich peptides preferentially (Berntsson et al., 2009). Two crystal structures of OppA with different nonapeptides show binding in different registers from Lactococcus lactis subsp. lactis (Streptococcus lactis) (see 2 papers)
41% identity, 88% coverage of query (236 bits)
TC 3.A.1.5.24 / Q8ZNJ8 YejF, component of The antimicrobial peptide (protamine, melittin, polymyxin B, human defensin (HBD)-1 and HBD-2 exporter, YejABEF (Eswarappa et al., 2008). Prefers N-formyl methionine peptides, such as Microcin C (of prokaryotic origin) to non formylated peptides (of eukaryotic origin) from Salmonella typhimurium (see paper)
47% identity, 77% coverage of query (234 bits)
YejF / b2180 putative oligopeptide ABC transporter ATP binding subunit YejF (EC 7.4.2.6) from Escherichia coli K-12 substr. MG1655 (see 6 papers)
YejF / P33916 putative oligopeptide ABC transporter ATP binding subunit YejF (EC 7.4.2.6) from Escherichia coli (strain K12) (see 3 papers)
TC 3.A.1.5.21 / P33916 YejF, component of The Microcin C/peptide uptake porter, YejABEF from Escherichia coli (strain K12) (see 3 papers)
yejF / RF|NP_416685 uncharacterized ABC transporter ATP-binding protein yejF from Escherichia coli K12 (see paper)
48% identity, 77% coverage of query (233 bits)
TC 3.A.1.5.13 / Q9WXS9 TM0074, component of Probable xylan oligosaccharide porter (Conners et al., 2005). Induced by xylan and xylose. Regulated by xylose-responsive regulator XylR (see paper)
40% identity, 88% coverage of query (230 bits)
DPPD_CALS4 / Q8RDH4 Dipeptide transport ATP-binding protein DppD; EC 7.4.2.9 from Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis) (see paper)
41% identity, 89% coverage of query (224 bits)
4fwiB / Q8RDH4 Crystal structure of the nucleotide-binding domain of a dipeptide abc transporter (see paper)
40% identity, 89% coverage of query (218 bits)
SapD / b1291 putrescine ABC exporter ATP binding protein SapD (EC 7.6.2.16) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
SapD / P0AAH4 putrescine ABC exporter ATP binding protein SapD (EC 7.6.2.16) from Escherichia coli (strain K12) (see 5 papers)
SAPD_ECOLI / P0AAH4 Putrescine export system ATP-binding protein SapD from Escherichia coli (strain K12) (see 2 papers)
38% identity, 94% coverage of query (214 bits)
3c4jA Abc protein artp in complex with atp-gamma-s
31% identity, 75% coverage of query (116 bits)
3c41J / D0VWX4 Abc protein artp in complex with amp-pnp/mg2+
31% identity, 75% coverage of query (116 bits)
2olkA Abc protein artp in complex with adp-beta-s
31% identity, 75% coverage of query (116 bits)
2oljA Abc protein artp in complex with adp/mg2+
31% identity, 75% coverage of query (116 bits)
MetN / b0199 L-methionine/D-methionine ABC transporter ATP binding subunit (EC 7.4.2.11) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
MetN / P30750 L-methionine/D-methionine ABC transporter ATP binding subunit (EC 7.4.2.11) from Escherichia coli (strain K12) (see 3 papers)
METN_ECOLI / P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 7 papers)
P30750 ABC-type methionine transporter (subunit 2/2) (EC 7.4.2.11) from Escherichia coli (see 3 papers)
TC 3.A.1.24.1 / P30750 MetN, D-methionine transport ATP-binding protein, component of The L- and D-methionine porter (also transports formyl-L-methionine and other methionine derivatives) (Zhang et al., 2003). The 3.7A structure of MetNI has been solved. An allosteric regulatory mechanism operates at the level of transport activity, so increased intracellular levels of the transported ligand stabilize an inward-facing, ATPase-inactive state of MetNI to inhibit further ligand translocation into the cell from Escherichia coli (see 5 papers)
31% identity, 78% coverage of query (114 bits)
6cvlD / P30750 Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
31% identity, 78% coverage of query (113 bits)
3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form
31% identity, 78% coverage of query (113 bits)
3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form
31% identity, 78% coverage of query (113 bits)
8g4cB / O34697 Bceabs atpgs high res tm (see paper)
30% identity, 72% coverage of query (110 bits)
7tchB Bceab e169q variant atp-bound conformation
30% identity, 72% coverage of query (108 bits)
ECFA1_STRT2 / Q5M243 Energy-coupling factor transporter ATP-binding protein EcfA1; ECF transporter A component EcfA1; EC 7.-.-.- from Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) (see paper)
TC 3.A.1.25.6 / Q5M243 Energy-coupling factor transporter ATP-binding protein EcfA 2, component of Riboflavin ECF transport system, EcfAA'T/RibU from Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311)
30% identity, 74% coverage of query (106 bits)
5d3mA / Q1GBJ0 Folate ecf transporter: amppnp bound state (see paper)
32% identity, 72% coverage of query (104 bits)
Build an alignment for BWI76_RS17225 and 47 homologs with ≥ 30% identity
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5lilA / Q2EHL8 Structure of aggregatibacter actinomycetemcomitans macb bound to atpys (p21) (see paper)
28% identity, 73% coverage of query (102 bits)
5lj7A / Q2EHL8 Structure of aggregatibacter actinomycetemcomitans macb bound to atp (p21) (see paper)
28% identity, 73% coverage of query (102 bits)
2d62A / O57933 Crystal structure of multiple sugar binding transport atp- binding protein
29% identity, 71% coverage of query (102 bits)
sugC / P9WQI3 ABC-type trehalose transporter ATP-binding protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
SUGC_MYCTU / P9WQI3 Trehalose import ATP-binding protein SugC; MtbSugC; Nucleotide-binding domain of SugABC transporter; NBD of SugABC transporter; SugABC transporter ATPase SugC; EC 7.5.2.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
TC 3.A.1.1.31 / O50454 PROBABLE SUGAR-TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER SUGC, component of The trehalose-recycling ABC transporter, LpqY-SugA-SugB-SugC (essential for virulence) from Mycobacterium tuberculosis (see 2 papers)
30% identity, 76% coverage of query (101 bits)
8bmpA Cryo-em structure of the folate-specific ecf transporter complex in msp2n2 lipid nanodiscs bound to atp and adp
31% identity, 72% coverage of query (99.8 bits)
4u00A / Q5SJ55 Crystal structure of ttha1159 in complex with adp (see paper)
28% identity, 75% coverage of query (99.4 bits)
PotA / b1126 spermidine preferential ABC transporter ATP binding subunit (EC 7.6.2.11; EC 7.6.2.16) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
PotA / P69874 spermidine preferential ABC transporter ATP binding subunit (EC 7.6.2.11) from Escherichia coli (strain K12) (see 5 papers)
POTA_ECOLI / P69874 Spermidine/putrescine import ATP-binding protein PotA; EC 7.6.2.11 from Escherichia coli (strain K12) (see 6 papers)
TC 3.A.1.11.1 / P69874 Spermidine/putrescine import ATP-binding protein PotA aka B1126, component of Polyamine (putrescine/spermidine) uptake porter from Escherichia coli (see 9 papers)
potA / MB|P69874 spermidine/putrescine ABC transporter, ATP-binding protein PotA; EC 3.6.3.31 from Escherichia coli K12 (see 10 papers)
27% identity, 70% coverage of query (98.2 bits)
4ymuJ / Q8RCC2 Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
29% identity, 74% coverage of query (97.8 bits)
1vciA / O57758 Crystal structure of the atp-binding cassette of multisugar transporter from pyrococcus horikoshii ot3 complexed with atp (see paper)
29% identity, 71% coverage of query (96.7 bits)
P0AAH0 Phosphate import ATP-binding protein PstB; ABC phosphate transporter; Phosphate-transporting ATPase; EC 7.3.2.1 from Escherichia coli (strain K12)
27% identity, 77% coverage of query (95.9 bits)
MALK_SALTY / P19566 Maltose/maltodextrin import ATP-binding protein MalK; EC 7.5.2.1 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
28% identity, 72% coverage of query (95.5 bits)
1oxvD Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus
29% identity, 73% coverage of query (94.7 bits)
1oxvA Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus
29% identity, 73% coverage of query (94.7 bits)
GLCV_SACS2 / Q97UY8 Glucose import ATP-binding protein GlcV; EC 7.5.2.- from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see 3 papers)
TC 3.A.1.1.13 / Q97UY8 GlcV, component of Glucose, mannose, galactose porter from Sulfolobus solfataricus (see 3 papers)
1oxuA / Q97UY8 Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus (see paper)
29% identity, 73% coverage of query (94.7 bits)
8hprC Lpqy-sugabc in state 4
30% identity, 73% coverage of query (92.8 bits)
8hprD Lpqy-sugabc in state 4
30% identity, 73% coverage of query (92.8 bits)
2awnB / P68187 Crystal structure of the adp-mg-bound e. Coli malk (crystallized with atp-mg) (see paper)
27% identity, 72% coverage of query (92.4 bits)
1q12A Crystal structure of the atp-bound e. Coli malk
27% identity, 72% coverage of query (92.4 bits)
1g291 / Q9YGA6 Malk (see paper)
27% identity, 71% coverage of query (92.4 bits)
3puyA Crystal structure of an outward-facing mbp-maltose transporter complex bound to amp-pnp after crystal soaking of the pretranslocation state
27% identity, 72% coverage of query (92.4 bits)
3puxA Crystal structure of an outward-facing mbp-maltose transporter complex bound to adp-bef3
27% identity, 72% coverage of query (92.4 bits)
3puwA Crystal structure of an outward-facing mbp-maltose transporter complex bound to adp-alf4
27% identity, 72% coverage of query (92.4 bits)
3puvA Crystal structure of an outward-facing mbp-maltose transporter complex bound to adp-vo4
27% identity, 72% coverage of query (92.4 bits)
MalK / b4035 maltose ABC transporter ATP binding subunit (EC 7.5.2.1) from Escherichia coli K-12 substr. MG1655 (see 31 papers)
MalK / P68187 maltose ABC transporter ATP binding subunit (EC 7.5.2.1) from Escherichia coli (strain K12) (see 29 papers)
MALK_ECOLI / P68187 Maltose/maltodextrin import ATP-binding protein MalK; EC 7.5.2.1 from Escherichia coli (strain K12) (see 6 papers)
P68187 ABC-type maltose transporter (subunit 3/3) (EC 7.5.2.1) from Escherichia coli (see paper)
TC 3.A.1.1.1 / P68187 Maltose/maltodextrin import ATP-binding protein MalK aka B4035, component of Maltooligosaccharide porter. The 3-D structure has been reported by Oldham et al. (2007). An altering access mechanism has been suggested for the maltose transporter resulting from rigid-body rotations (Khare et al., 2009). Bordignon et al. (2010) and Schneider et al. (2012) have reviewed the extensive knowledge available on MalEFGK2, its mode of action and its regulatory interactions from Escherichia coli (see 17 papers)
malK / RF|NP_418459 maltose/maltodextrin import ATP-binding protein malK; EC 3.6.3.19 from Escherichia coli K12 (see 18 papers)
27% identity, 72% coverage of query (92.0 bits)
8hplC / A0R2C0 Lpqy-sugabc in state 1 (see paper)
29% identity, 73% coverage of query (91.3 bits)
2awnC / P68187 Crystal structure of the adp-mg-bound e. Coli malk (crystallized with atp-mg) (see paper)
26% identity, 72% coverage of query (84.0 bits)
TGD3_ARATH / Q9AT00 Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic; ABC transporter I family member 13; ABC transporter ABCI.13; AtABCI13; Non-intrinsic ABC protein 11; AtNAP11 from Arabidopsis thaliana (Mouse-ear cress) (see 6 papers)
TC 3.A.1.27.2 / Q9AT00 Tdg3, component of The chloroplast lipid (trigalactosyl diacyl glycerol (TDG)) transporter, Tdg1,2,3 (Lu et al., 2007). Lipids such as mono- and digalactolipids are synthesized in the endoplasmic reticulum (ER) of plant cells and transferred to the thylakoid membranes of chloroplasts. Mutations in an outer chloroplastic envelope protein with 350 aas and 7 putative TMSs in the last 250 residues may catalyze translocation as part of a lipid transfer complex from Arabidopsis thaliana (Mouse-ear cress) (see 7 papers)
26% identity, 74% coverage of query (82.8 bits)
2pmkA Crystal structures of an isolated abc-atpase in complex with tnp-adp
29% identity, 72% coverage of query (82.0 bits)
2ff7A The abc-atpase of the abc-transporter hlyb in the adp bound state
29% identity, 72% coverage of query (82.0 bits)
3b5jA Crystal structures of the s504a mutant of an isolated abc-atpase in complex with tnp-adp
29% identity, 72% coverage of query (80.9 bits)
7sgrE / Q8FDZ8 Structure of hemolysin a secretion system hlyb/d complex (see paper)
29% identity, 72% coverage of query (80.1 bits)
7chaI / Q9HVW1 Cryo-em structure of p.Aeruginosa mlafebd with amppnp (see paper)
27% identity, 71% coverage of query (79.3 bits)
7zk6A Abcb1 l335c mutant (mabcb1) in the outward facing state bound to 2 molecules of aac
26% identity, 75% coverage of query (79.3 bits)
7zk5A Abcb1 l335c mutant (mabcb1) in the outward facing state bound to aac
26% identity, 75% coverage of query (79.3 bits)
7zkaA Abcb1 v978c mutant (mabcb1) in the outward facing state bound to aac
26% identity, 75% coverage of query (79.3 bits)
8dckA Structure of hemolysin a secretion system hlyb/d complex, atp-bound
29% identity, 72% coverage of query (79.0 bits)
1xefA Crystal structure of the atp/mg2+ bound composite dimer of hlyb-nbd
29% identity, 72% coverage of query (78.2 bits)
7m33C The structure of bacillus subtilis bmrcd in the inward-facing conformation bound to hoechst-33342 and atp
30% identity, 70% coverage of query (77.0 bits)
8t1pC Heterodimeric abc transporter bmrcd in the occluded conformation bound to adpvi: bmrcd_oc-adpvi
30% identity, 70% coverage of query (77.0 bits)
8fhkC / O07550 Heterodimeric abc transporter bmrcd in the occluded conformation bound to atp: bmrcd_oc-atp (see paper)
30% identity, 70% coverage of query (77.0 bits)
1ji0A / Q9X0M3 Crystal structure analysis of the abc transporter from thermotoga maritima
26% identity, 70% coverage of query (76.6 bits)
MsbA / b0914 ATP-binding lipopolysaccharide transport protein (EC 7.5.2.6) from Escherichia coli K-12 substr. MG1655 (see 54 papers)
msbA / P60752 ATP-binding lipopolysaccharide transport protein (EC 7.5.2.6) from Escherichia coli (strain K12) (see 57 papers)
MSBA_ECOLI / P60752 ATP-dependent lipid A-core flippase; Lipid A export ATP-binding/permease protein MsbA; Lipid flippase; EC 7.5.2.6 from Escherichia coli (strain K12) (see 17 papers)
P60752 ABC-type lipid A-core oligosaccharide transporter (EC 7.5.2.6); P-type phospholipid transporter (EC 7.6.2.1) from Escherichia coli (see 13 papers)
TC 3.A.1.106.1 / P60752 Phospholipid, LPS, lipid A and drug exporter, MsbA, which flips the substrate from the inner leaflet of the cytoplasmic membrane to the outer leaflet (Eckford and Sharom, 2010). MsbA also confers drug resistance to azidopine, daunomycin, vinblastine, Hoechst 33342 and ethidium (Reuter et al., 2003). Four x-ray structures, trapped in different conformations, two with and two without nucleotide, have been solved (Ward et al., 2007). They suggest an alternating accessibility mode of transport with major conformational changes from Escherichia coli (see 11 papers)
msbA / MB|P60752 lipid A export ATP-binding/permease protein msbA; EC 3.6.3.- from Escherichia coli K12 (see 24 papers)
29% identity, 73% coverage of query (75.9 bits)
6bppA E. Coli msba in complex with lps and inhibitor g092
30% identity, 70% coverage of query (75.9 bits)
6bplA E. Coli msba in complex with lps and inhibitor g907
30% identity, 70% coverage of query (75.9 bits)
7ph3A / P60752 Amp-pnp bound nanodisc reconstituted msba with nanobodies, spin- labeled at position a60c (see paper)
30% identity, 70% coverage of query (75.9 bits)
8dmmA Structure of the vanadate-trapped msba bound to kdl
30% identity, 70% coverage of query (75.5 bits)
7bcwA Structure of msba in salipro with adp vanadate
30% identity, 70% coverage of query (75.5 bits)
7ph2A Nanodisc reconstituted msba in complex with nanobodies, spin-labeled at position a60c
30% identity, 70% coverage of query (75.5 bits)
Q00748 Multidrug resistance protein homolog 65; P-glycoprotein 65; EC 7.6.2.2 from Drosophila melanogaster (Fruit fly)
29% identity, 71% coverage of query (75.5 bits)
7mewA E. Coli msba in complex with g247
30% identity, 70% coverage of query (75.5 bits)
7selA E. Coli msba in complex with lps and inhibitor g7090 (compound 3)
29% identity, 70% coverage of query (73.6 bits)
6fn1A Zosuquidar and uic2 fab complex of human-mouse chimeric abcb1 (abcb1hm)
27% identity, 71% coverage of query (72.4 bits)
MRP8_HUMAN / Q96J66 ATP-binding cassette sub-family C member 11; Multidrug resistance-associated protein 8; EC 7.6.2.2; EC 7.6.2.3 from Homo sapiens (Human) (see 9 papers)
TC 3.A.1.208.13 / Q96J66 Cyclic nucleotide (cAMP and cGMP) efflux pump, MRP8 (ABCC11); also exports other nucleoside and nucleotide analogues, and confers resistance to fluoropyrimidines and the anti-AIDS drug, 2',3'-dideoxycytidine (Guo et al., 2003). Human earwax consists of wet and dry types. Dry earwax is frequent in East Asians, whereas wet earwax is common in other populations. A SNP, 538G --> A (rs17822931), in the ABCC11 gene is responsible for determination of earwax type. Cells with allele A show a lower excretory activity for cGMP than those with allele G. The 538G --> A SNP is the first example of DNA polymorphism determining a visible genetic trait (see 6 papers)
29% identity, 73% coverage of query (72.4 bits)
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Lawrence Berkeley National Laboratory