Searching for up to 100 curated homologs for BWI76_RS18250 FitnessBrowser__Koxy:BWI76_RS18250 (326 a.a.)

Found high-coverage hits (≥70%) to 16 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

AraF / b1901 arabinose ABC transporter periplasmic binding protein (EC 7.5.2.13; EC 7.5.2.12) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
AraF / P02924 arabinose ABC transporter periplasmic binding protein (EC 7.5.2.13) from Escherichia coli (strain K12) (see 2 papers)
ARAF_ECOLI / P02924 L-arabinose-binding periplasmic protein; ABP from Escherichia coli (strain K12) (see paper)
TC 3.A.1.2.2 / P02924 AraF aka B1901, component of Arabinose porter from Escherichia coli (see 10 papers)
    92% identity, 100% coverage of query (627 bits)

1abeA / P02924 Novel stereospecificity of the l-arabinose-binding protein (see paper)
    92% identity, 93% coverage of query (580 bits)

5abpA Substrate specificity and affinity of a protein modulated by bound water molecules
    92% identity, 93% coverage of query (580 bits)

1abfA Substrate specificity and affinity of a protein modulated by bound water molecules
    92% identity, 93% coverage of query (580 bits)

Pf6N2E2_5968 ABC transporter for D-galactose/L-arabinose, substrate-binding component from Pseudomonas fluorescens FW300-N2E2
    59% identity, 100% coverage of query (382 bits)

Pf1N1B4_411 ABC transporter for D-galactose/L-arabinose, substrate-binding component from Pseudomonas fluorescens FW300-N1B4
    60% identity, 98% coverage of query (374 bits)

BPHYT_RS16935 D-galactose ABC transporter, substrate-binding component from Burkholderia phytofirmans PsJN
    49% identity, 99% coverage of query (312 bits)

4kzkA / Q2T607 The structure of the periplasmic l-arabinose binding protein from burkholderia thailandensis
    47% identity, 92% coverage of query (279 bits)

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Build an alignment for BWI76_RS18250 and 8 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

APIBP_RHIEC / Q2JZQ5 D-apiose import binding protein; D-apiose binding SBP from Rhizobium etli (strain CFN 42 / ATCC 51251) (see paper)
    23% identity, 86% coverage of query (53.1 bits)

5ibqA / Q2JZQ5 Crystal structure of an abc solute binding protein from rhizobium etli cfn 42 (rhe_pf00037,target efi-511357) in complex with alpha-d-apiose
    23% identity, 86% coverage of query (53.1 bits)

4ry0A Crystal structure of ribose transporter solute binding protein rhe_pf00037 from rhizobium etli cfn 42, target efi-511357, in complex with d-ribose
    23% identity, 86% coverage of query (53.1 bits)

TC 3.A.1.2.11 / Q92WK4 EryG aka RB0335, component of The erythritol permease, EryEFG (Geddes et al., 2010) (probably orthologous to 3.A.1.2.16) from Rhizobium meliloti (Sinorhizobium meliloti) (see paper)
    21% identity, 89% coverage of query (50.8 bits)

APIBP_RHIR8 / B9JK76 D-apiose import binding protein; D-apiose binding SBP from Rhizobium rhizogenes (strain K84 / ATCC BAA-868) (Agrobacterium radiobacter) (see paper)
    21% identity, 96% coverage of query (50.4 bits)

P23905 D-galactose/methyl-galactoside binding periplasmic protein MglB; D-galactose-binding periplasmic protein; GBP; D-galactose/D-glucose-binding protein; GGBP from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
    25% identity, 90% coverage of query (49.7 bits)

APIBP_PARG4 / B1G898 D-apiose import binding protein; D-apiose binding SBP from Paraburkholderia graminis (strain ATCC 700544 / DSM 17151 / LMG 18924 / NCIMB 13744 / C4D1M) (see paper)
    22% identity, 72% coverage of query (48.5 bits)

MglB / b2150 D-galactose/methyl-galactoside ABC transporter periplasmic binding protein from Escherichia coli K-12 substr. MG1655 (see 43 papers)
MglB / P0AEE5 D-galactose/methyl-galactoside ABC transporter periplasmic binding protein from Escherichia coli (strain K12) (see 42 papers)
MGLB_ECOLI / P0AEE5 D-galactose/methyl-galactoside binding periplasmic protein MglB; D-galactose-binding periplasmic protein; GBP; D-galactose/D-glucose-binding protein; GGBP from Escherichia coli (strain K12) (see 3 papers)
TC 3.A.1.2.3 / P0AEE5 D-galactose-binding periplasmic protein DGAL aka MglB aka B2150, component of Galactose/glucose (methyl galactoside) porter from Escherichia coli (see 10 papers)
    24% identity, 90% coverage of query (46.6 bits)

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