Sites on a Tree

 

Searching for up to 100 curated homologs for BWI76_RS26550 FitnessBrowser__Koxy:BWI76_RS26550 (464 a.a.)

Found high-coverage hits (≥70%) to 9 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

YbhI / b0770 putative tricarboxylate transporter from Escherichia coli K-12 substr. MG1655 (see 3 papers)
    39% identity, 99% coverage of query (341 bits)

DIT21_ARATH / Q9FMF7 Dicarboxylate transporter 2.1, chloroplastic; AtpDCT1; Glutamate/malate translocator from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
    34% identity, 99% coverage of query (261 bits)

DIT1_ARATH / Q9LXV3 Dicarboxylate transporter 1, chloroplastic; 2-oxoglutarate/malate translocator 1; AtpOMT1 from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
    32% identity, 97% coverage of query (256 bits)

DIT1_SPIOL / Q41364 Dicarboxylate transporter 1, chloroplastic; SODIT1; 2-oxoglutarate/malate translocator from Spinacia oleracea (Spinach) (see 2 papers)
TC 2.A.47.3.1 / Q41364 2-oxoglutarate:malate antiporter (SodiTl) from Spinacia oleracea (Spinach) (see paper)
SODIT1 2-oxoglutarate/malate translocator from Spinacia oleracea (see paper)
SODiT1 / AAA68148.1 2-oxoglutarate/malate translocator from Spinacia oleracea (see paper)
    32% identity, 99% coverage of query (252 bits)

DIT22_ARATH / Q9FMF8 Dicarboxylate transporter 2.2, chloroplastic; AtpDCT2 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
    33% identity, 96% coverage of query (237 bits)

DIT2_SPIOL / Q8L7Z9 Dicarboxylate transporter 2, chloroplastic; Glutamate/malate translocator from Spinacia oleracea (Spinach) (see paper)
    34% identity, 99% coverage of query (236 bits)

YbdS / b0612 citrate:succinate antiporter from Escherichia coli K-12 substr. MG1655 (see 3 papers)
citT / P0AE74 citrate:succinate antiporter from Escherichia coli (strain K12) (see 3 papers)
CITT_ECOLI / P0AE74 Citrate/succinate antiporter; Citrate carrier; Citrate transporter from Escherichia coli (strain K12) (see paper)
TC 2.A.47.3.2 / P0AE74 Citrate:succinate antiporter from Escherichia coli (see 4 papers)
    33% identity, 97% coverage of query (231 bits)

TC 2.A.47.3.4 / Q6D017 The pmf-dependent citrate uptake system, Cit1 from Erwinia carotovora subsp. atroseptica (Pectobacterium atrosepticum) (see paper)
    31% identity, 100% coverage of query (224 bits)

YgjC / b3063 L-tartrate:succinate antiporter from Escherichia coli K-12 substr. MG1655
ttdT / P39414 L-tartrate:succinate antiporter from Escherichia coli (strain K12) (see 5 papers)
TTDT_ECOLI / P39414 L-tartrate/succinate antiporter; Tartrate carrier; Tartrate transporter from Escherichia coli (strain K12) (see 3 papers)
TC 2.A.47.3.3 / P39414 L-tartrate:succinate antiporter, TtdT (YgjE). (also takes up meso and L-tartrate and succinate; does not transport D-tartrate) from Escherichia coli (see 8 papers)
ttdT / RF|NP_417535 L-tartrate/succinate antiporter from Escherichia coli K12 (see 8 papers)
    31% identity, 95% coverage of query (216 bits)

Build an alignment

Build an alignment for BWI76_RS26550 and 9 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory