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Searching for up to 100 curated homologs for CA265_RS08345 FitnessBrowser__Pedo557:CA265_RS08345 (109 a.a.)

Found high-coverage hits (≥70%) to 5 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

FUCM_XANCP / Q8P3K1 L-fucose mutarotase; Fucose 1-epimerase; Type-2 mutarotase; EC 5.1.3.29 from Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) (see paper)
    46% identity, 100% coverage of query (116 bits)

BT1276 L-fucose mutarotase FucU (EC 5.1.3.29) from Bacteroides thetaiotaomicron VPI-5482
    48% identity, 100% coverage of query (102 bits)

SM_b21108 L-fucose mutarotase (EC 5.1.3.29) from Sinorhizobium meliloti 1021
    34% identity, 98% coverage of query (50.8 bits)

Build an alignment

Build an alignment for CA265_RS08345 and 3 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

7bywA / F0Q4R9 Crystal structure of acidovorax avenae l-fucose mutarotase (l-fucose- bound form) (see paper)
    26% identity, 85% coverage of query (48.1 bits)

YiiL / b3901 L-rhamnose mutarotase (EC 5.1.3.32) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
rhaM / P32156 L-rhamnose mutarotase (EC 5.1.3.32) from Escherichia coli (strain K12) (see 2 papers)
RHAM_ECOLI / P32156 L-rhamnose mutarotase; Rhamnose 1-epimerase; Type-3 mutarotase; EC 5.1.3.32 from Escherichia coli (strain K12) (see 2 papers)
P32156 L-rhamnose mutarotase (EC 5.1.3.32) from Escherichia coli (see 2 papers)
1x8dA / P32156 Crystal structure of e. Coli yiil protein containing l-rhamnose (see paper)
rhaM / RF|NP_418337 L-rhamnose mutarotase; EC 5.1.3.n3 from Escherichia coli K12 (see 6 papers)
    31% identity, 72% coverage of query (41.2 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory