Searching for up to 100 curated homologs for CA265_RS08620 FitnessBrowser__Pedo557:CA265_RS08620 (233 a.a.)
Found high-coverage hits (≥70%) to 24 curated proteins.
Removed hits that are identical to the query, leaving 23
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
Echvi_0503 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Echinicola vietnamensis KMM 6221, DSM 17526
71% identity, 100% coverage of query (355 bits)
Shewana3_2065 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Shewanella sp. ANA-3
55% identity, 99% coverage of query (263 bits)
AraD / b0061 L-ribulose-5-phosphate 4-epimerase AraD (EC 5.1.3.4) from Escherichia coli K-12 substr. MG1655 (see 19 papers)
araD / P08203 L-ribulose-5-phosphate 4-epimerase AraD (EC 5.1.3.4) from Escherichia coli (strain K12) (see 18 papers)
ARAD_ECOLI / P08203 L-ribulose-5-phosphate 4-epimerase AraD; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli (strain K12) (see 11 papers)
araD / GB|BAB96630.1 L-ribulose-5-phosphate 4-epimerase; EC 5.1.3.4 from Escherichia coli K12 (see paper)
52% identity, 98% coverage of query (246 bits)
YjfX / b4198 L-ribulose-5-phosphate 4-epimerase UlaF (EC 5.1.3.4) from Escherichia coli K-12 substr. MG1655 (see 2 papers)
ulaF / P39306 L-ribulose-5-phosphate 4-epimerase UlaF (EC 5.1.3.4) from Escherichia coli (strain K12) (see paper)
ULAF_ECOLI / P39306 L-ribulose-5-phosphate 4-epimerase UlaF; L-ascorbate utilization protein F; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli (strain K12) (see 3 papers)
52% identity, 98% coverage of query (240 bits)
1jdiA / P08203 Crystal structure of l-ribulose-5-phosphate 4-epimerase (see paper)
51% identity, 94% coverage of query (231 bits)
YiaS / b3583 L-ribulose-5-phosphate 4-epimerase SgbE (EC 5.1.3.4) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
sgbE / P37680 L-ribulose-5-phosphate 4-epimerase SgbE (EC 5.1.3.4) from Escherichia coli (strain K12) (see 3 papers)
SGBE_ECOLI / P37680 L-ribulose-5-phosphate 4-epimerase SgbE; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli (strain K12) (see 2 papers)
49% identity, 98% coverage of query (228 bits)
ARAD_BACSU / P94525 L-ribulose-5-phosphate 4-epimerase; Phosphoribulose isomerase; EC 5.1.3.4 from Bacillus subtilis (strain 168) (see paper)
48% identity, 98% coverage of query (216 bits)
C4B4W3 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Corynebacterium glutamicum (see paper)
36% identity, 97% coverage of query (130 bits)
2fuaA / P0AB87 L-fuculose 1-phosphate aldolase crystal form t with cobalt (see paper)
30% identity, 90% coverage of query (82.8 bits)
Prd / b2800 L-fuculose-phosphate aldolase (EC 4.1.2.17) from Escherichia coli K-12 substr. MG1655 (see 9 papers)
fucA / P0AB87 L-fuculose-phosphate aldolase (EC 4.1.2.17) from Escherichia coli (strain K12) (see 8 papers)
FUCA_ECOLI / P0AB87 L-fuculose phosphate aldolase; D-ribulose-phosphate aldolase; L-fuculose-1-phosphate aldolase; EC 4.1.2.17 from Escherichia coli (strain K12) (see 7 papers)
fucA / RF|NP_417280 L-fuculose-1-phosphate aldolase from Escherichia coli K12 (see 3 papers)
30% identity, 90% coverage of query (82.8 bits)
4fuaA L-fuculose-1-phosphate aldolase complex with pgh
30% identity, 93% coverage of query (82.4 bits)
1dzuP L-fuculose-1-phosphate aldolase from escherichia coli mutant t26a
30% identity, 90% coverage of query (80.9 bits)
7x78A L-fuculose 1-phosphate aldolase
30% identity, 90% coverage of query (79.3 bits)
BWI76_RS22915 L-fuculose phosphate aldolase (EC 4.1.2.17) from Klebsiella michiganensis M5al
30% identity, 90% coverage of query (77.4 bits)
Build an alignment for CA265_RS08620 and 14 homologs with ≥ 30% identity
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ALD2_ECO45 / B7MMH7 5-methylthioribulose-1-phosphate/5-deoxyribulose-1-phosphate aldolase; EC 4.1.2.62 from Escherichia coli O45:K1 (strain S88 / ExPEC) (see paper)
27% identity, 89% coverage of query (65.9 bits)
F8D9F5 D-ribulose 1-phosphate aldolase (EC 4.1.2.17) from Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) (see paper)
27% identity, 78% coverage of query (64.3 bits)
ald2 / J7RCN0 5-deoxyribulose 1-phosphate aldolase (EC 4.1.2.62) from Escherichia coli (see paper)
27% identity, 89% coverage of query (64.3 bits)
MJ1418 / Q58813 fuculose-1-phosphate aldolase subunit (EC 4.1.2.17) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (see paper)
FUCA_METJA / Q58813 L-fuculose phosphate aldolase; L-fuculose-1-phosphate aldolase; EC 4.1.2.17 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see 3 papers)
Q58813 L-fuculose-phosphate aldolase (EC 4.1.2.17) from Methanocaldococcus jannaschii (see paper)
24% identity, 83% coverage of query (50.8 bits)
OTNC_PECAS / Q6CZ24 3-oxo-tetronate 4-phosphate decarboxylase; EC 4.1.1.104 from Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) (Erwinia carotovora subsp. atroseptica) (see paper)
Q6CZ24 3-dehydro-4-phosphotetronate decarboxylase (EC 4.1.1.104) from Pectobacterium atrosepticum (see paper)
27% identity, 81% coverage of query (50.4 bits)
6voqA / Q0QC76 Crystal structure of ygbl, a putative aldolase/epimerase/decarboxylase from klebsiella pneumoniae
25% identity, 83% coverage of query (49.3 bits)
I7MAL0 methylthioribulose 1-phosphate dehydratase (EC 4.2.1.109) from Tetrahymena thermophila (see paper)
26% identity, 73% coverage of query (47.8 bits)
MUG14_SCHPO / Q9P5M9 Meiotically up-regulated gene 14 protein from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see 2 papers)
22% identity, 76% coverage of query (47.4 bits)
4xxfA / A0A0J9X279 L-fuculose 1-phosphate aldolase from glaciozyma antarctica pi12 (see paper)
22% identity, 73% coverage of query (45.1 bits)
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Lawrence Berkeley National Laboratory