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Searching for up to 100 curated homologs for CA265_RS13790 FitnessBrowser__Pedo557:CA265_RS13790 (102 a.a.)

Found high-coverage hits (≥70%) to 7 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

PLH21_FORAG / T2KM13 L-rhamnose mutarotase; P21_mutarotase; Polysaccharide utilization locus H protein P21; PUL H protein P21; Rhamnose 1-epimerase; Type-3 mutarotase; EC 5.1.3.32 from Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) (see paper)
    60% identity, 99% coverage of query (134 bits)

rhaU / Q7BSH1 L-rhamnose mutarotase monomer (EC 5.1.3.32) from Rhizobium leguminosarum bv. trifolii (see paper)
RHAM_RHILT / Q7BSH1 L-rhamnose mutarotase; Rhamnose 1-epimerase; Type-3 mutarotase; EC 5.1.3.32 from Rhizobium leguminosarum bv. trifolii (see 2 papers)
Q7BSH1 L-rhamnose mutarotase (EC 5.1.3.32) from Rhizobium leguminosarum (see paper)
    56% identity, 98% coverage of query (117 bits)

2qlwB / Q7BSH1 Crystal structure of rhamnose mutarotase rhau of rhizobium leguminosarum (see paper)
    56% identity, 98% coverage of query (117 bits)

2qlxA Crystal structure of rhamnose mutarotase rhau of rhizobium leguminosarum in complex with l-rhamnose
    56% identity, 98% coverage of query (117 bits)

YiiL / b3901 L-rhamnose mutarotase (EC 5.1.3.32) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
rhaM / P32156 L-rhamnose mutarotase (EC 5.1.3.32) from Escherichia coli (strain K12) (see 2 papers)
RHAM_ECOLI / P32156 L-rhamnose mutarotase; Rhamnose 1-epimerase; Type-3 mutarotase; EC 5.1.3.32 from Escherichia coli (strain K12) (see 2 papers)
P32156 L-rhamnose mutarotase (EC 5.1.3.32) from Escherichia coli (see 2 papers)
1x8dA / P32156 Crystal structure of e. Coli yiil protein containing l-rhamnose (see paper)
rhaM / RF|NP_418337 L-rhamnose mutarotase; EC 5.1.3.n3 from Escherichia coli K12 (see 6 papers)
    42% identity, 99% coverage of query (95.9 bits)

Build an alignment

Build an alignment for CA265_RS13790 and 5 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Additional hits (identity < 30%)

7bywA / F0Q4R9 Crystal structure of acidovorax avenae l-fucose mutarotase (l-fucose- bound form) (see paper)
    28% identity, 99% coverage of query (55.8 bits)

SM_b21108 L-fucose mutarotase (EC 5.1.3.29) from Sinorhizobium meliloti 1021
    32% identity, 74% coverage of query (50.4 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory