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Searching for up to 100 curated homologs for CA265_RS14780 FitnessBrowser__Pedo557:CA265_RS14780 (1129 a.a.)

Found high-coverage hits (≥70%) to 11 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Q8F222 methylmalonyl-CoA mutase (EC 5.4.99.2) from Leptospira interrogans serovar lai str. 56601 (see paper)
    68% identity, 100% coverage of query (1614 bits)

ICMF_GEOKA / Q5KUG0 Fused isobutyryl-CoA mutase; EC 5.4.99.13; EC 3.6.5.- from Geobacillus kaustophilus (strain HTA426) (see 2 papers)
    63% identity, 100% coverage of query (1454 bits)

ICMF_CUPMC / Q1LRY0 Fused isobutyryl-CoA mutase; EC 5.4.99.13; EC 3.6.5.- from Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34) (Ralstonia metallidurans) (see 3 papers)
Q1LRY0 isobutyryl-CoA mutase (EC 5.4.99.13) from Cupriavidus metallidurans (see 3 papers)
    61% identity, 99% coverage of query (1348 bits)

4xc6A / Q1LRY0 Isobutyryl-coa mutase fused with bound adenosylcobalamin, gdp, and mg (holo-icmf/gdp) (see paper)
    60% identity, 99% coverage of query (1330 bits)

5cjwA Isobutyryl-coa mutase fused with bound adenosylcobalamin, gdp, mg (holo-icmf/gdp), and substrate pivalyl-coenzyme a
    60% identity, 99% coverage of query (1325 bits)

5cjtA Isobutyryl-coa mutase fused with bound adenosylcobalamin, gdp, mg (holo-icmf/gdp), and substrate isobutyryl-coenzyme a
    60% identity, 99% coverage of query (1322 bits)

5cjvA Isobutyryl-coa mutase fused with bound adenosylcobalamin, gdp, mg (holo-icmf/gdp), and substrate isovaleryl-coenzyme a
    60% identity, 99% coverage of query (1320 bits)

Q8Y2U5 methylmalonyl-CoA mutase (EC 5.4.99.2) from Ralstonia solanacearum (see paper)
    59% identity, 99% coverage of query (1318 bits)

4xc7A Isobutyryl-coa mutase fused with bound butyryl-coa and without cobalamin or gdp (apo-icmf)
    60% identity, 99% coverage of query (1310 bits)

ICMF_NOCFA / Q5Z110 Fused isobutyryl-CoA mutase; EC 5.4.99.13; EC 3.6.5.- from Nocardia farcinica (strain IFM 10152) (see paper)
    56% identity, 100% coverage of query (1208 bits)

ICMF_PARXL / Q146L7 Fused isobutyryl-CoA mutase; EC 5.4.99.13; EC 3.6.5.- from Paraburkholderia xenovorans (strain LB400) (see paper)
    57% identity, 84% coverage of query (1107 bits)

Build an alignment

Build an alignment for CA265_RS14780 and 11 homologs with ≥ 30% identity

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory