Sites on a Tree


Searching for up to 100 curated homologs for CA265_RS15360 FitnessBrowser__Pedo557:CA265_RS15360 (127 a.a.)

Found high-coverage hits (≥70%) to 3 curated proteins.

Removed hits that are identical to the query, leaving 2

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Echvi_1841 predicted cytochrome c component of periplasmic glucoside 3-dehydrogenase (EC from Echinicola vietnamensis KMM 6221, DSM 17526
    44% identity, 84% coverage of query (101 bits)

P00099 Cytochrome c-551; Cytochrome C8; Cytochrome c551 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
    34% identity, 78% coverage of query (68.2 bits)

Build an alignment

Build an alignment for CA265_RS15360 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory