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Searching for up to 100 curated homologs for CA265_RS15375 FitnessBrowser__Pedo557:CA265_RS15375 (405 a.a.)

Found high-coverage hits (≥70%) to 8 curated proteins.

Removed hits that are identical to the query, leaving 7

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Echvi_1845 predicted 3-ketohexose transporter from Echinicola vietnamensis KMM 6221, DSM 17526
    59% identity, 99% coverage of query (477 bits)

YegT / b2098 putative transporter YegT from Escherichia coli K-12 substr. MG1655 (see 4 papers)
    42% identity, 98% coverage of query (317 bits)

NupG / b2964 nucleoside:H+ symporter NupG from Escherichia coli K-12 substr. MG1655 (see 7 papers)
nupG / P0AFF4 nucleoside:H+ symporter NupG from Escherichia coli (strain K12) (see 20 papers)
NUPG_ECOLI / P0AFF4 Nucleoside permease NupG; Nucleoside-transport system protein NupG from Escherichia coli (strain K12) (see 7 papers)
TC 2.A.1.10.1 / P0AFF4 Nucleoside porter, NupG from Escherichia coli (see 4 papers)
nupG nucleoside permease nupG from Escherichia coli K12 (see 5 papers)
    32% identity, 97% coverage of query (222 bits)

XapB / b2406 xanthosine:H+ symporter XapB from Escherichia coli K-12 substr. MG1655 (see 3 papers)
xapB / P45562 xanthosine:H+ symporter XapB from Escherichia coli (strain K12) (see 4 papers)
XAPB_ECOLI / P45562 Xanthosine permease; Xanthosine transporter from Escherichia coli (strain K12) (see 3 papers)
TC 2.A.1.10.2 / P45562 Xanthosine porter, XapB from Escherichia coli (strain K12)
    34% identity, 97% coverage of query (221 bits)

CCNA_01700 predicted 3-ketohexose transporter from Caulobacter crescentus NA1000
    31% identity, 97% coverage of query (157 bits)

Build an alignment

Build an alignment for CA265_RS15375 and 5 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

TC 2.A.1.65.9 / Q45632 Maltose permease from Geobacillus stearothermophilus (see paper)
    23% identity, 90% coverage of query (57.4 bits)

E0IXR1 protein-Npi-phosphohistidine-sucrose phosphotransferase (EC 2.7.1.211) from Escherichia coli (see paper)
    21% identity, 100% coverage of query (46.2 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory