Sites on a Tree

 

Searching for up to 100 curated homologs for CA265_RS22975 FitnessBrowser__Pedo557:CA265_RS22975 (260 a.a.)

Found high-coverage hits (≥70%) to 4 curated proteins.

Removed hits that are identical to the query, leaving 3

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

CCNA_01698 predicted periplasmic 3-ketoglycoside hydrolase (DUF1080) from Caulobacter crescentus NA1000
    64% identity, 96% coverage of query (324 bits)

4qhzC / A6LIT1 Crystal structure of a putative glycosyl hydrolase (bdi_3914) from parabacteroides distasonis atcc 8503 at 2.13 a resolution
    56% identity, 88% coverage of query (266 bits)

Echvi_2921 predicted 3-ketoglycoside hydrolase (DUF1080) from Echinicola vietnamensis KMM 6221, DSM 17526
    52% identity, 99% coverage of query (256 bits)

Build an alignment

Build an alignment for CA265_RS22975 and 3 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory