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Searching for up to 100 curated homologs for CCNA_01031 FitnessBrowser__Caulo:CCNA_01031 (550 a.a.)

Found high-coverage hits (≥70%) to 4 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

TC 2.A.1.6.11 / F8SVK1 Acetate/haloacid transporter, Dehp2, with a possible atypical topology from Burkholderia sp. MBA4
    66% identity, 98% coverage of query (725 bits)

TC 2.A.1.6.8 / Q7X4L6 The acetate/monochloroacetate (haloacid) permease, Deh4p (Km = 5.5 mμM for acetate; 9 mμM for monochloroacetate) from Burkholderia cepacia (see 2 papers)
    65% identity, 99% coverage of query (717 bits)

Build an alignment

Build an alignment for CCNA_01031 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

citA / GB|AAA88472.1 citrate transporter from Escherichia coli (see paper)
    29% identity, 71% coverage of query (159 bits)

tcuC / P0A2G3 propane-1,2,3-tricarboxylate-proton symporter from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 4 papers)
CITA_SALTY / P0A2G3 Citrate-proton symporter; Citrate carrier protein; Citrate transporter; Citrate utilization determinant; Citrate utilization protein A from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
TC 2.A.1.6.7 / P0A2G3 The citrate/tricarballylate:H+ symporter (CitA or TcuC); probably orthologous to 2.A.1.6.1 from Salmonella typhimurium (see 2 papers)
    30% identity, 71% coverage of query (159 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory