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Searching for up to 100 curated homologs for CCNA_01514 FitnessBrowser__Caulo:CCNA_01514 (166 a.a.)

Found high-coverage hits (≥70%) to 3 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

PP_1168 D-glucuronate / D-galacturonate TRAP transporter, small permease component from Pseudomonas putida KT2440
    34% identity, 92% coverage of query (84.7 bits)

Build an alignment

Build an alignment for CCNA_01514 and 1 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

SIAQ_VIBCH / Q9KR65 Sialic acid TRAP transporter small permease protein SiaQ from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (see 2 papers)
TC 2.A.56.1.6 / B9TSN0 TRAP-type C4-dicarboxylate transport system small permease component, component of The Na+-dependent sialic acid uptake porter, SiaPQM. SiaQ and SiaM form a 1:1 stoichiometric complex from Vibrio cholerae (see paper)
    27% identity, 76% coverage of query (51.6 bits)

Shew_1445 dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), small permease component from Shewanella loihica PV-4
    25% identity, 95% coverage of query (43.9 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory