Searching for up to 100 curated homologs for CCNA_01800 FitnessBrowser__Caulo:CCNA_01800 (450 a.a.)
Found high-coverage hits (≥70%) to 42 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
ODPB1_ARATH / Q38799 Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial; PDHE1-B; Protein MACCI-BOU; EC 1.2.4.1 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
Q38799 pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 1/2) (EC 1.2.4.1) from Arabidopsis thaliana (see paper)
66% identity, 72% coverage of query (450 bits)
A2Z2Z0 pyruvate dehydrogenase (acetyl-transferring) (subunit 1/2) (EC 1.2.4.1) from Oryza sativa Indica Group (see paper)
64% identity, 72% coverage of query (437 bits)
P52904 pyruvate dehydrogenase system (subunit 3/3) (EC 1.2.1.104) from Pisum sativum (see paper)
64% identity, 72% coverage of query (427 bits)
ODPB_DROME / Q7K5K3 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; EC 1.2.4.1 from Drosophila melanogaster (Fruit fly) (see paper)
65% identity, 71% coverage of query (425 bits)
ODPB_YEAST / P32473 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; Pyruvate dehydrogenase complex component E1 beta; PDHE1-B; EC 1.2.4.1 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
61% identity, 72% coverage of query (419 bits)
ODPB_SCHPO / Q09171 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; PDHE1-B; EC 1.2.4.1 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
pdb1 / RF|NP_596272.1 pyruvate dehydrogenase e1 component beta subunit Pdb1; EC 1.2.4.1 from Schizosaccharomyces pombe (see paper)
60% identity, 75% coverage of query (409 bits)
PDHB / P11177 pyruvate dehydrogenase E1 component β subunit from Homo sapiens (see 7 papers)
ODPB_HUMAN / P11177 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; PDHE1-B; EC 1.2.4.1 from Homo sapiens (Human) (see 6 papers)
P11177 pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 1/2) (EC 1.2.4.1) from Homo sapiens (see 2 papers)
61% identity, 72% coverage of query (408 bits)
6cerD / P11177 Human pyruvate dehydrogenase complex e1 component v138m mutation (see paper)
62% identity, 71% coverage of query (407 bits)
6cfoB Human pyruvate dehydrogenase e1 component complex with covalent tdp adduct acetyl phosphinate
62% identity, 71% coverage of query (407 bits)
Q9D051 pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104) from Mus musculus (see paper)
59% identity, 76% coverage of query (405 bits)
ODPB_CHATD / G0RYE0 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; Pyruvate dehydrogenase complex component E1 beta; PDHE1-B; EC 1.2.4.1 from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) (Thermochaetoides thermophila) (see 2 papers)
G0RYE0 pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 1/2) (EC 1.2.4.1) from Chaetomium thermophilum (see paper)
61% identity, 71% coverage of query (389 bits)
pdhC pyruvate dehydrogenase (lipoamide) from Emericella nidulans (see paper)
57% identity, 72% coverage of query (375 bits)
PDHB / P26269 pyruvate dehydrogenase β subunit from Ascaris suum (see paper)
57% identity, 71% coverage of query (374 bits)
P73405 pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 1/2) (EC 1.2.4.1) from Synechocystis sp. PCC 6803 (see 2 papers)
47% identity, 70% coverage of query (301 bits)
Q46143 acetoin dehydrogenase system (EC 2.3.1.190) from Clostridium magnum (see paper)
acoB TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit; EC 1.1.1.- from Clostridium magnum (see paper)
AAA21745.1 TPP-dependent acetoin dehydrogenase beta-subunit from Clostridium magnum (see paper)
45% identity, 72% coverage of query (282 bits)
Q1KSF0 pyruvate dehydrogenase (acetyl-transferring) (EC 1.2.4.1) from Toxoplasma gondii (see paper)
42% identity, 73% coverage of query (272 bits)
Q9HWN0 acetoin dehydrogenase system (subunit 1/2) (EC 2.3.1.190) from Pseudomonas aeruginosa (see paper)
43% identity, 71% coverage of query (249 bits)
P21874 pyruvate dehydrogenase (acetyl-transferring) (EC 1.2.4.1) from Geobacillus stearothermophilus (see paper)
40% identity, 72% coverage of query (244 bits)
3dufD / P21874 Snapshots of catalysis in the e1 subunit of the pyruvate dehydrogenase multi-enzyme complex (see paper)
40% identity, 71% coverage of query (244 bits)
3dv0D Snapshots of catalysis in the e1 subunit of the pyruvate dehydrogenase multi-enzyme complex
40% identity, 71% coverage of query (244 bits)
3dv0B Snapshots of catalysis in the e1 subunit of the pyruvate dehydrogenase multi-enzyme complex
40% identity, 71% coverage of query (244 bits)
1w85B The crystal structure of pyruvate dehydrogenase e1 bound to the peripheral subunit binding domain of e2
40% identity, 71% coverage of query (244 bits)
Q9HIA4 branched-chain-2-oxoacid decarboxylase (subunit 2/2) (EC 4.1.1.72) from Thermoplasma acidophilum (see paper)
43% identity, 70% coverage of query (242 bits)
acoB / Q3A7P0 acetoin:DCPIP oxidoreductase β subunit from Syntrophotalea carbinolica (strain DSM 2380 / NBRC 103641 / GraBd1) (see paper)
43% identity, 71% coverage of query (235 bits)
1umbD / Q5SLR3 Branched-chain 2-oxo acid dehydrogenase (e1) from thermus thermophilus hb8 in holo-form (see paper)
43% identity, 71% coverage of query (235 bits)
1umdD Branched-chain 2-oxo acid dehydrogenase (e1) from thermus thermophilus hb8 with 4-methyl-2-oxopentanoate as an intermediate
43% identity, 71% coverage of query (235 bits)
1umcD Branched-chain 2-oxo acid dehydrogenase (e1) from thermus thermophilus hb8 with 4-methylpentanoate
43% identity, 71% coverage of query (235 bits)
ODBB_THET8 / Q5SLR3 2-oxoisovalerate dehydrogenase subunit beta; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDH E1-beta; EC 1.2.4.4 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see paper)
43% identity, 71% coverage of query (234 bits)
acoB / AAA18916.1 acetoin:DCPIP oxidoreductase beta subunit from Pelobacter carbinolicus (see paper)
43% identity, 71% coverage of query (234 bits)
Q97YF5 acetoin dehydrogenase system (EC 2.3.1.190) from Saccharolobus solfataricus (see paper)
39% identity, 71% coverage of query (231 bits)
ODPB_STAAU / P0A0A3 Pyruvate dehydrogenase E1 component subunit beta; EC 1.2.4.1 from Staphylococcus aureus (see paper)
38% identity, 71% coverage of query (228 bits)
pdhB / AAC24933.1 pyruvate decarboxylase E-1 beta subunit from Bacillus subtilis (see 3 papers)
37% identity, 72% coverage of query (220 bits)
ODBB2_ARATH / Q9LDY2 2-oxoisovalerate dehydrogenase subunit beta 2, mitochondrial; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta; Protein DARK INDUCIBLE 4; EC 1.2.4.4 from Arabidopsis thaliana (Mouse-ear cress) (see 4 papers)
37% identity, 71% coverage of query (219 bits)
Q52015 acetoin dehydrogenase system (EC 2.3.1.190) from Pseudomonas putida (see paper)
37% identity, 72% coverage of query (204 bits)
ppdcβ / G1UHX5 phenylpyruvate decarboxylase β subunit (EC 4.1.1.43) from Streptomyces virginiae (see paper)
39% identity, 72% coverage of query (202 bits)
ODBB_BOVIN / P21839 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta; EC 1.2.4.4 from Bos taurus (Bovine) (see paper)
35% identity, 73% coverage of query (192 bits)
BKDB_MYCTU / P9WIS1 3-methyl-2-oxobutanoate dehydrogenase subunit beta; Branched-chain alpha-ketoacid dehydrogenase E1 component subunit beta; BCKADH E1-beta; EC 1.2.4.4 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 3 papers)
35% identity, 72% coverage of query (191 bits)
Q6P3A8 branched-chain alpha-keto acid dehydrogenase system (subunit 1/2) (EC 1.2.1.25) from Mus musculus (see paper)
34% identity, 73% coverage of query (190 bits)
P35738 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (subunit 1/2) (EC 1.2.4.4) from Rattus norvegicus (see paper)
34% identity, 73% coverage of query (190 bits)
BCKDHB / P21953 branched-chain α-keto acid dehydrogenase E1 component β subunit (EC 1.2.4.4) from Homo sapiens (see 15 papers)
ODBB_HUMAN / P21953 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta; EC 1.2.4.4 from Homo sapiens (Human) (see 5 papers)
P21953 branched-chain alpha-keto acid dehydrogenase system (subunit 1/2) (EC 1.2.1.25) from Homo sapiens (see 5 papers)
34% identity, 73% coverage of query (188 bits)
1dtwB Human branched-chain alpha-keto acid dehydrogenase
34% identity, 71% coverage of query (187 bits)
2j9fD / P21953 Human branched-chain alpha-ketoacid dehydrogenase-decarboxylase e1b (see paper)
34% identity, 71% coverage of query (187 bits)
Build an alignment for CCNA_01800 and 42 homologs with ≥ 30% identity
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Lawrence Berkeley National Laboratory