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Searching for up to 100 curated homologs for CCNA_03626 FitnessBrowser__Caulo:CCNA_03626 (320 a.a.)

Found high-coverage hits (≥70%) to 14 curated proteins.

Removed hits that are identical to the query, leaving 13

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

SMc00917 ATP phosphoribosyltransferase (EC 2.4.2.17) from Sinorhizobium meliloti 1021
    49% identity, 71% coverage of query (197 bits)

AtATP-PRT1 / Q9S762 ATP-phosphoribosyl transferase (EC 2.4.2.17) from Arabidopsis thaliana (see paper)
HIS1A_ARATH / Q9S762 ATP phosphoribosyltransferase 1, chloroplastic; ATP-PRTase 1; AtATP-PRT1; EC 2.4.2.17 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
Q9S762 ATP phosphoribosyltransferase (EC 2.4.2.17) from Arabidopsis thaliana (see paper)
    32% identity, 74% coverage of query (108 bits)

AtATP-PRT2 / Q8GSJ1 ATP-phosphoribosyl transferase (EC 2.4.2.17) from Arabidopsis thaliana (see paper)
HIS1B_ARATH / Q8GSJ1 ATP phosphoribosyltransferase 2, chloroplastic; ATP-PRTase 2; AtATP-PRT2; EC 2.4.2.17 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
    32% identity, 74% coverage of query (105 bits)

HIS1_SALTY / P00499 ATP phosphoribosyltransferase; ATP-PRT; ATP-PRTase; EC 2.4.2.17 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
    31% identity, 77% coverage of query (76.6 bits)

Ga0059261_1280 ATP phosphoribosyltransferase (EC 2.4.2.17) from Sphingomonas koreensis DSMZ 15582
    31% identity, 73% coverage of query (66.6 bits)

BPHYT_RS17715 ATP phosphoribosyltransferase (EC 2.4.2.17) from Burkholderia phytofirmans PsJN
    30% identity, 74% coverage of query (64.3 bits)

Build an alignment

Build an alignment for CCNA_03626 and 6 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

Q9Z472 ATP phosphoribosyltransferase (EC 2.4.2.17) from Corynebacterium glutamicum (see 2 papers)
    28% identity, 71% coverage of query (59.7 bits)

1usyG / Q9X0D2 Atp phosphoribosyl transferase (hisg:hisz) complex from thermotoga maritima (see paper)
    25% identity, 70% coverage of query (58.5 bits)

4yb6A / Q5HSJ4 Adenosine triphosphate phosphoribosyltransferase from campylobacter jejuni in complex with the inhibitors amp and histidine (see paper)
    27% identity, 77% coverage of query (57.0 bits)

Q5HSJ4 ATP phosphoribosyltransferase (EC 2.4.2.17) from Campylobacter jejuni (see 3 papers)
Q9PM78 ATP phosphoribosyltransferase (EC 2.4.2.17) from Campylobacter jejuni (see paper)
    27% identity, 77% coverage of query (57.0 bits)

4yb7A Adenosine triphosphate phosphoribosyltransferase from campylobacter jejuni in complex with atp
    27% identity, 77% coverage of query (57.0 bits)

4yb6E Adenosine triphosphate phosphoribosyltransferase from campylobacter jejuni in complex with the inhibitors amp and histidine
    27% identity, 77% coverage of query (57.0 bits)

4yb7C Adenosine triphosphate phosphoribosyltransferase from campylobacter jejuni in complex with atp
    27% identity, 77% coverage of query (57.0 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory