Searching for up to 100 curated homologs for Dsui_0414 FitnessBrowser__PS:Dsui_0414 (352 a.a.)
Found high-coverage hits (≥70%) to 50 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
TC 3.A.1.5.20 / P42065 AppF, component of 5-6 amino acyl oligopeptide transporter AppA-F from Bacillus subtilis (see 3 papers)
50% identity, 90% coverage of query (308 bits)
TC 3.A.1.5.37 / B1W1L8 Putative peptide ABC transporter ATP-binding protein, component of The ABC BldKA-E (SGR_2418-2414) oligopeptide transport system. It controls aerial mycelium formation on glucose media. Probably involved in extracellular peptide signalling (Akanuma et al. 2011). Probably orthologous to 3.A.1.5.35 from Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)
49% identity, 91% coverage of query (305 bits)
TC 3.A.1.5.36 / Q8CJS2 Putative peptide transport system ATP-binding subunit, component of Peptide transporter encoded adjacent to the putative transport system with TC#3.A.1.5.35 (Akanuma et al. 2011). Induced by exogenous S-adenosylmethionine (SAM) at a concentration of 2muM which also enhanced antibiotic production and inhibited morphological development (Park et al. 2005). SAM can be imported into cells. Mutants in the bldK genes confer resistance to the toxic tripeptide, bialaphos from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
47% identity, 96% coverage of query (303 bits)
TC 3.A.1.5.12 / Q9X0F3 TM1063, component of Probable rhamnose oligosaccharide porter. Induced by rhamnose (see paper)
48% identity, 90% coverage of query (298 bits)
TC 3.A.1.5.29 / Q9WXR3 Oligopeptide ABC transporter, ATP-binding protein, component of Probable xylan oligosaccharide porter (Conners et al. 2005). Induced by cylan and xylose. Regulated by xylose-responsive regulator XylR from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
47% identity, 90% coverage of query (297 bits)
Q5V9R8 ABC-type oligopeptide transporter (EC 7.4.2.6) from Vibrio fluvialis (see paper)
TC 3.A.1.5.22 / Q5V9R8 OppF, component of The peptide transporter OppA,B,C,D,F (influences biofilm formation; Lee et al., 2004). Similar to 3.A.1.5.1, OppA is similar to the Vibrio furnissii OppA that provides several functions: hemolysis, antibiotic resistance, and virulence from Vibrio fluvialis (see paper)
46% identity, 88% coverage of query (284 bits)
TC 3.A.1.5.15 / Q9X272 TM1750, component of Probable mannose/mannoside porter. Induced by beta-mannan (Conners et al., 2005). Regulated by mannose-responsive regulator manR (see paper)
42% identity, 93% coverage of query (284 bits)
TC 3.A.1.5.1 / P08007 OppF aka STM1742, component of Oligopeptide porter (also takes up amino glycoside antibiotics such as kanamycin, streptomycin and neomycin as well as cell wall-derived peptides such as murein tripeptide). It transports substrate peptides of 2-5 amino acids with highest affinity for tripeptides. Also transports δ-aminolevulinic acid (ALA). [May be regulated by PTS Enzyme INtr-aspartokinase.] ATP-binding to OppDF may result in donation of peptide to OppBC and simultaneous release of OppA from Salmonella typhimurium (see 2 papers)
47% identity, 91% coverage of query (280 bits)
OppF / b1247 murein tripeptide ABC transporter / oligopeptide ABC transporter ATP binding subunit OppF (EC 7.4.2.6) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
oppF / P77737 murein tripeptide ABC transporter / oligopeptide ABC transporter ATP binding subunit OppF (EC 7.4.2.6) from Escherichia coli (strain K12) (see 2 papers)
TC 3.A.1.5.41 / P77737 Oligopeptide transport ATP-binding protein OppF, component of Oligopeptide transporter, OppABCDF/MppA/YgiS from Escherichia coli (strain K12)
48% identity, 91% coverage of query (278 bits)
DppF / b3540 dipeptide ABC transporter ATP binding subunit DppF (EC 7.4.2.9) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
DppF / P37313 dipeptide ABC transporter ATP binding subunit DppF (EC 7.4.2.9) from Escherichia coli (strain K12) (see 2 papers)
DPPF_ECOLI / P37313 Dipeptide transport ATP-binding protein DppF; EC 7.4.2.9 from Escherichia coli (strain K12) (see 3 papers)
46% identity, 91% coverage of query (278 bits)
OPPF_BACSU / P24137 Oligopeptide transport ATP-binding protein OppF; Stage 0 sporulation protein KE from Bacillus subtilis (strain 168) (see paper)
47% identity, 85% coverage of query (276 bits)
Q8ZQM4 ABC-type glutathione transporter (EC 7.4.2.10) from Salmonella enterica subsp. enterica serovar Typhimurium (see paper)
47% identity, 83% coverage of query (268 bits)
TC 3.A.1.5.27 / P45094 Dipeptide transport ATP-binding protein DppF, component of The glutathione uptake porter, DppBCDF with the glutathione binding protein, DppA (GbpA; HbpA). Takes up reduced (GSH) and oxidized (GSSG) but not bulky glutathione S conjugates or glutathione derivatives with C-terminal modifications from Haemophilus influenzae (see 2 papers)
46% identity, 89% coverage of query (268 bits)
TC 3.A.1.5.39 / W0WLZ8 Dipeptide transport ATP-binding protein DppF, component of Di- and tri-peptide transporter, DppBCDF with periplasmic substrate binding receptors, A1, A3, A5, A7 and A9, each with differing specificities for peptides from Pseudomonas aeruginosa MH38
44% identity, 90% coverage of query (263 bits)
GsiA / b0829 glutathione ABC transporter ATP binding subunit GsiA (EC 7.4.2.10) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
gsiA / P75796 glutathione ABC transporter ATP binding subunit GsiA (EC 7.4.2.10) from Escherichia coli (strain K12) (see 3 papers)
GSIA_ECOLI / P75796 Glutathione import ATP-binding protein GsiA; EC 7.4.2.10 from Escherichia coli (strain K12) (see paper)
P75796 ABC-type glutathione transporter (EC 7.4.2.10) from Escherichia coli (see paper)
TC 3.A.1.5.11 / P75796 Hypothetical ABC transporter ATP-binding protein yliA, component of Glutathione porter, YliABCD or GsiABCD from Escherichia coli (see 4 papers)
50% identity, 79% coverage of query (262 bits)
DPPF_PSEAB / A0A0H2ZH52 Di/tripeptide transport ATP-binding protein DppF; EC 7.4.2.9 from Pseudomonas aeruginosa (strain UCBPP-PA14) (see paper)
43% identity, 90% coverage of query (260 bits)
TC 3.A.1.5.19 / Q2FZR4 OppF, component of The major oligopeptide uptake porter, Opp-3 (of four paralogues, this is the only one that mediates nitrogen nutrition from Staphylococcus aureus (strain NCTC 8325)
47% identity, 74% coverage of query (253 bits)
TC 3.A.1.5.4 / O30542 AccC, component of Agrocinopine (an opine)/Agrocin 84 (an antibiotic) porter from Agrobacterium radiobacter (see 3 papers)
46% identity, 90% coverage of query (251 bits)
TC 3.A.1.5.32 / F0TFS9 Oligopeptide ABC transporter ATP-binding protein, component of ABC α-galactoside uptake porter from Lactobacillus acidophilus (strain 30SC)
43% identity, 76% coverage of query (240 bits)
TC 3.A.1.5.23 / Q9F9T4 EppD, component of The Ethylene diamine tetraacetate (EDTA) uptake porter, EppABCD (see 2 papers)
46% identity, 81% coverage of query (235 bits)
Q73NS6 ABC-type dipeptide transporter (EC 7.4.2.9) from Treponema denticola (see paper)
39% identity, 83% coverage of query (234 bits)
TC 3.A.1.5.18 / O31310 OppF, component of The oligopeptide transporter OppA1-5, B1, C1, DF (functions with five binding proteins of differing induction properties and peptide specificities; OppA1-3 are chromosomally encoded; OppA4 and 5 are plasmid encoded.) from Borrelia burgdorferi (Lyme disease spirochete) (see 2 papers)
45% identity, 76% coverage of query (233 bits)
DdpF / b1483 putative D,D-dipeptide ABC transporter ATP-binding subunit DdpF from Escherichia coli K-12 substr. MG1655 (see 2 papers)
DDPF_ECOLI / P77622 Probable D,D-dipeptide transport ATP-binding protein DdpF from Escherichia coli (strain K12) (see paper)
42% identity, 87% coverage of query (232 bits)
TC 3.A.1.5.12 / Q9X0F4 TM1064, component of Probable rhamnose oligosaccharide porter. Induced by rhamnose (see paper)
40% identity, 90% coverage of query (230 bits)
A0A150QXP6 5-(carboxyamino)imidazole ribonucleotide mutase (EC 5.4.99.18) from Bacillus anthracis (see paper)
42% identity, 90% coverage of query (229 bits)
TC 3.A.1.5.37 / B1W1L9 Putative peptide ABC transporter ATP-binding protein, component of The ABC BldKA-E (SGR_2418-2414) oligopeptide transport system. It controls aerial mycelium formation on glucose media. Probably involved in extracellular peptide signalling (Akanuma et al. 2011). Probably orthologous to 3.A.1.5.35 from Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)
39% identity, 90% coverage of query (226 bits)
TC 3.A.1.5.10 / P0A2V4 OppF, component of Oligopeptide porter (transports peptides of 4-35) amino acyl residues; di- and tripeptides are not transported; hydrophobic basic peptides are preferred). OppA determines the specificity of the system (Doeven et al., 2004). A large cavity in OppA binds proline-rich peptides preferentially (Berntsson et al., 2009). Two crystal structures of OppA with different nonapeptides show binding in different registers from Lactococcus lactis subsp. lactis (Streptococcus lactis) (see 2 papers)
43% identity, 75% coverage of query (224 bits)
TC 3.A.1.5.15 / Q9X271 TM1749, component of Probable mannose/mannoside porter. Induced by beta-mannan (Conners et al., 2005). Regulated by mannose-responsive regulator manR (see paper)
39% identity, 90% coverage of query (221 bits)
YejF / b2180 putative oligopeptide ABC transporter ATP binding subunit YejF (EC 7.4.2.6) from Escherichia coli K-12 substr. MG1655 (see 6 papers)
YejF / P33916 putative oligopeptide ABC transporter ATP binding subunit YejF (EC 7.4.2.6) from Escherichia coli (strain K12) (see 3 papers)
TC 3.A.1.5.21 / P33916 YejF, component of The Microcin C/peptide uptake porter, YejABEF from Escherichia coli (strain K12) (see 3 papers)
yejF / RF|NP_416685 uncharacterized ABC transporter ATP-binding protein yejF from Escherichia coli K12 (see paper)
45% identity, 75% coverage of query (218 bits)
TC 3.A.1.5.36 / Q93IU0 BldKD, putative ABC transporter intracellular ATPase subunit, component of Peptide transporter encoded adjacent to the putative transport system with TC#3.A.1.5.35 (Akanuma et al. 2011). Induced by exogenous S-adenosylmethionine (SAM) at a concentration of 2muM which also enhanced antibiotic production and inhibited morphological development (Park et al. 2005). SAM can be imported into cells. Mutants in the bldK genes confer resistance to the toxic tripeptide, bialaphos from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
41% identity, 90% coverage of query (215 bits)
OppD / b1246 murein tripeptide ABC transporter / oligopeptide ABC transporter ATP binding subunit OppD (EC 7.4.2.6) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
oppD / P76027 murein tripeptide ABC transporter / oligopeptide ABC transporter ATP binding subunit OppD (EC 7.4.2.6) from Escherichia coli (strain K12) (see 2 papers)
TC 3.A.1.5.41 / P76027 Oligopeptide transport ATP-binding protein OppD, component of Oligopeptide transporter, OppABCDF/MppA/YgiS from Escherichia coli (strain K12)
oppD oligopeptide ABC transporter, ATP-binding protein OppD from Escherichia coli K12 (see paper)
42% identity, 86% coverage of query (212 bits)
TC 3.A.1.5.24 / Q8ZNJ8 YejF, component of The antimicrobial peptide (protamine, melittin, polymyxin B, human defensin (HBD)-1 and HBD-2 exporter, YejABEF (Eswarappa et al., 2008). Prefers N-formyl methionine peptides, such as Microcin C (of prokaryotic origin) to non formylated peptides (of eukaryotic origin) from Salmonella typhimurium (see paper)
44% identity, 75% coverage of query (211 bits)
TC 3.A.1.5.20 / P42064 AppD, component of 5-6 amino acyl oligopeptide transporter AppA-F from Bacillus subtilis (see 2 papers)
39% identity, 86% coverage of query (210 bits)
8j5qD / P9WQJ5 Cryo-em structure of mycobacterium tuberculosis oppabcd in the pre- translocation state (see paper)
45% identity, 76% coverage of query (209 bits)
8j5tD Cryo-em structure of mycobacterium tuberculosis oppabcd in the catalytic intermediate state
45% identity, 75% coverage of query (206 bits)
8j5sD Cryo-em structure of mycobacterium tuberculosis oppabcd in the pre- catalytic intermediate state
45% identity, 75% coverage of query (206 bits)
DPPD_CALS4 / Q8RDH4 Dipeptide transport ATP-binding protein DppD; EC 7.4.2.9 from Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis) (see paper)
35% identity, 89% coverage of query (184 bits)
4fwiB / Q8RDH4 Crystal structure of the nucleotide-binding domain of a dipeptide abc transporter (see paper)
35% identity, 89% coverage of query (178 bits)
SapD / b1291 putrescine ABC exporter ATP binding protein SapD (EC 7.6.2.16) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
SapD / P0AAH4 putrescine ABC exporter ATP binding protein SapD (EC 7.6.2.16) from Escherichia coli (strain K12) (see 5 papers)
SAPD_ECOLI / P0AAH4 Putrescine export system ATP-binding protein SapD from Escherichia coli (strain K12) (see 2 papers)
34% identity, 90% coverage of query (163 bits)
4u00A / Q5SJ55 Crystal structure of ttha1159 in complex with adp (see paper)
38% identity, 72% coverage of query (150 bits)
MetN / b0199 L-methionine/D-methionine ABC transporter ATP binding subunit (EC 7.4.2.11) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
MetN / P30750 L-methionine/D-methionine ABC transporter ATP binding subunit (EC 7.4.2.11) from Escherichia coli (strain K12) (see 3 papers)
METN_ECOLI / P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 7 papers)
P30750 ABC-type methionine transporter (subunit 2/2) (EC 7.4.2.11) from Escherichia coli (see 3 papers)
TC 3.A.1.24.1 / P30750 MetN, D-methionine transport ATP-binding protein, component of The L- and D-methionine porter (also transports formyl-L-methionine and other methionine derivatives) (Zhang et al., 2003). The 3.7A structure of MetNI has been solved. An allosteric regulatory mechanism operates at the level of transport activity, so increased intracellular levels of the transported ligand stabilize an inward-facing, ATPase-inactive state of MetNI to inhibit further ligand translocation into the cell from Escherichia coli (see 5 papers)
34% identity, 71% coverage of query (137 bits)
6cvlD / P30750 Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
34% identity, 71% coverage of query (135 bits)
3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form
34% identity, 71% coverage of query (135 bits)
3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form
34% identity, 71% coverage of query (135 bits)
1oxvD Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus
32% identity, 73% coverage of query (120 bits)
1oxvA Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus
32% identity, 73% coverage of query (120 bits)
GLCV_SACS2 / Q97UY8 Glucose import ATP-binding protein GlcV; EC 7.5.2.- from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see 3 papers)
TC 3.A.1.1.13 / Q97UY8 GlcV, component of Glucose, mannose, galactose porter from Sulfolobus solfataricus (see 3 papers)
1oxuA / Q97UY8 Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus (see paper)
32% identity, 73% coverage of query (120 bits)
Build an alignment for Dsui_0414 and 47 homologs with ≥ 30% identity
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1vciA / O57758 Crystal structure of the atp-binding cassette of multisugar transporter from pyrococcus horikoshii ot3 complexed with atp (see paper)
28% identity, 71% coverage of query (105 bits)
CED7_CAEEL / P34358 ABC transporter ced-7; Cell death protein 7 from Caenorhabditis elegans (see paper)
TC 3.A.1.211.4 / P34358 The aced cell death 7 (ced-7) protein (translocates molecules that mediate adhesion between dying and engulfing embryonic cells during programmed death) from Caenorhabditis elegans (see 4 papers)
ced-7 / RF|NP_001021226.1 ABC transporter ced-7 from Caenorhabditis elegans
24% identity, 70% coverage of query (69.7 bits)
7e7oA / P78363 Cryo-em structure of human abca4 in nrpe-bound state (see paper)
24% identity, 75% coverage of query (59.7 bits)
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Lawrence Berkeley National Laboratory