Searching for up to 100 curated homologs for Dsui_2117 FitnessBrowser__PS:Dsui_2117 (288 a.a.)

Found high-coverage hits (≥70%) to 11 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

AO353_17200 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) from Pseudomonas fluorescens FW300-N2E3
    39% identity, 90% coverage of query (173 bits)

PS417_06705 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) from Pseudomonas simiae WCS417
    39% identity, 90% coverage of query (173 bits)

PfGW456L13_4591 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) from Pseudomonas fluorescens GW456-L13
    38% identity, 90% coverage of query (170 bits)

CATJ_PSEKB / Q8VPF2 3-oxoadipate CoA-transferase subunit B; 3-oxoadipate:succinyl-CoA transferase subunit B; Beta-ketoadipate:succinyl-CoA transferase subunit B; EC 2.8.3.6 from Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13) (see paper)
Q8VPF2 3-oxoadipate CoA-transferase (subunit 1/2) (EC 2.8.3.6) from Pseudomonas knackmussii (see 2 papers)
    38% identity, 89% coverage of query (168 bits)

gctB / Q59112 GctB (EC 2.8.3.12) from Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / CCUG 9996 / CIP 106432 / VR4) (see paper)
Q59112 glutaconate CoA-transferase (subunit 1/2) (EC 2.8.3.12) from Acidaminococcus fermentans (see paper)
    36% identity, 85% coverage of query (154 bits)

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Build an alignment for Dsui_2117 and 5 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

CTFB_CLOAB / P23673 Acetoacetyl-CoA:acetate/butyrate CoA-transferase beta subunit; Butyrate--acetoacetate CoA-transferase subunit B; Coat B; EC 2.8.3.9 from Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) (see 3 papers)
    27% identity, 83% coverage of query (62.4 bits)

Pf6N2E2_2112 Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit B from Pseudomonas fluorescens FW300-N2E2
    24% identity, 81% coverage of query (50.4 bits)

SCO2A_RAT / Q5XIJ9 Succinyl-CoA:3-ketoacid coenzyme A transferase 2A, mitochondrial; 3-oxoacid CoA-transferase 2A; Testis-specific succinyl-CoA:3-oxoacid CoA-transferase 1; SCOT-t1; EC 2.8.3.5 from Rattus norvegicus (Rat) (see paper)
    26% identity, 78% coverage of query (49.7 bits)

5mzyB / Q1D4I3 Crystal structure of the decarboxylase aiba/aibb in complex with a possible transition state analog (see paper)
    24% identity, 86% coverage of query (48.1 bits)

5mzzB Crystal structure of the decarboxylase aiba/aibb in complex with 3- methylglutaconate
    24% identity, 86% coverage of query (47.8 bits)

5mzxB Crystal structure of the decarboxylase aiba/aibb in complex with 4'- diphospho pantetheine
    24% identity, 86% coverage of query (47.8 bits)

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