Searching for up to 100 curated homologs for Dsui_3154 FitnessBrowser__PS:Dsui_3154 (246 a.a.)
Found high-coverage hits (≥70%) to 5 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
DCTQ_RHOCA / O07837 C4-dicarboxylate TRAP transporter small permease protein DctQ from Rhodobacter capsulatus (Rhodopseudomonas capsulata) (see 2 papers)
TC 2.A.56.1.1 / O07837 DctQ, component of Tripartite dicarboxylate:H+ symporter (substrates include: fumarate, D- and L-malate, succinate, succinamide, orotate, iticonate and mesaconate) from Rhodobacter capsulatus (Rhodopseudomonas capsulata) (see 2 papers)
52% identity, 80% coverage of query (207 bits)
Build an alignment for Dsui_3154 and 1 homologs with ≥ 30% identity
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Shew_1445 dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), small permease component from Shewanella loihica PV-4
26% identity, 72% coverage of query (70.9 bits)
Sama_2210 alpha-ketoglutarate TRAP transporter, small permease component from Shewanella amazonensis SB2B
21% identity, 77% coverage of query (67.8 bits)
DCTQ_PSEAE / Q9HU17 C4-dicarboxylate TRAP transporter small permease protein DctQ from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
30% identity, 74% coverage of query (60.8 bits)
Psest_4269 C4-dicarboxylate transporter, DctQ subunit from Pseudomonas stutzeri RCH2
28% identity, 72% coverage of query (52.8 bits)
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Lawrence Berkeley National Laboratory