Searching for up to 100 curated homologs for Echvi_0060 FitnessBrowser__Cola:Echvi_0060 (624 a.a.)
Found high-coverage hits (≥70%) to 9 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
wbiI / GI|3135688 putative epimerase/dehydratase WbiI from Burkholderia pseudomallei (see paper)
41% identity, 85% coverage of query (382 bits)
EPSC_BACSU / P71052 Probable polysaccharide biosynthesis protein EpsC from Bacillus subtilis (strain 168) (see paper)
43% identity, 73% coverage of query (359 bits)
RfbU / CAA69127.1 mannosyl-transferase from Vibrio cholerae (see paper)
41% identity, 75% coverage of query (345 bits)
wbgZ / Q9F736 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining) (EC 4.2.1.135) from Shigella sonnei (see paper)
37% identity, 91% coverage of query (340 bits)
P72145 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting) (EC 4.2.1.115) from Pseudomonas aeruginosa (see paper)
36% identity, 89% coverage of query (337 bits)
wbpM / Q9KIC5 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining) (EC 4.2.1.135) from Pseudomonas aeruginosa (see 6 papers)
39% identity, 80% coverage of query (337 bits)
cpsE polysaccharide capsule synthesis protein CpsE from Streptococcus iniae (see paper)
43% identity, 71% coverage of query (333 bits)
pglF / Q0P9D4 UDP-N-acetylglucosamine C-6 dehydratase (EC 4.2.1.135) from Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) (see 3 papers)
PGLF_CAMJE / Q0P9D4 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase; UDP-GlcNAc C6 dehydratase; Protein glycosylation pathway protein F; UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining); EC 4.2.1.135 from Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) (see paper)
36% identity, 97% coverage of query (310 bits)
wbkD / Q2YMM0 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining) (EC 4.2.1.135) from Brucella abortus (strain 2308) (see 2 papers)
35% identity, 80% coverage of query (305 bits)
Build an alignment for Echvi_0060 and 9 homologs with ≥ 30% identity
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Lawrence Berkeley National Laboratory