Searching for up to 100 curated homologs for Echvi_0121 FitnessBrowser__Cola:Echvi_0121 (345 a.a.)
Found high-coverage hits (≥70%) to 43 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
Q3M4V2 3-dehydroquinate synthase (EC 4.2.3.4) from Trichormus variabilis (see paper)
40% identity, 82% coverage of query (187 bits)
Q8U0A8 3-dehydroquinate synthase (EC 4.2.3.4) from Pyrococcus furiosus (see paper)
41% identity, 76% coverage of query (184 bits)
AROB_HELPY / P56081 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori) (see paper)
39% identity, 90% coverage of query (182 bits)
6hqvA / G0S061 Pentafunctional arom complex from chaetomium thermophilum (see paper)
34% identity, 94% coverage of query (180 bits)
6c5cA / Q5AME2 Crystal structure of the 3-dehydroquinate synthase (dhqs) domain of aro1 from candida albicans sc5314 in complex with nadh (see paper)
38% identity, 79% coverage of query (177 bits)
Q9KNV2 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
37% identity, 79% coverage of query (174 bits)
1xagA / Q6GGU4 Crystal structure of staphlyococcus aureus 3-dehydroquinate synthase (dhqs) in complex with zn2+, NAD+ and carbaphosphonate (see paper)
35% identity, 77% coverage of query (168 bits)
1dqsA Crystal structure of dehydroquinate synthase (dhqs) complexed with carbaphosphonate, NAD+ and zn2+
36% identity, 85% coverage of query (168 bits)
3okfA / Q9KNV2 2.5 angstrom resolution crystal structure of 3-dehydroquinate synthase (arob) from vibrio cholerae
37% identity, 79% coverage of query (167 bits)
Q6GGU4 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Staphylococcus aureus (strain MRSA252)
35% identity, 77% coverage of query (167 bits)
ARO1_EMENI / P07547 Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans) (see 2 papers)
P07547 shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Aspergillus nidulans (see paper)
aromA pentafunctional AROM polypeptide; EC 1.1.1.25; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 4.2.3.4 from Emericella nidulans (see 4 papers)
36% identity, 85% coverage of query (166 bits)
1nr5B / P07547 Crystal structure of 3-dehydroquinate synthase (dhqs) in complex with zn2+, NAD and carbaphosphonate (see paper)
36% identity, 85% coverage of query (166 bits)
1nr5A / P07547 Crystal structure of 3-dehydroquinate synthase (dhqs) in complex with zn2+, NAD and carbaphosphonate (see paper)
36% identity, 85% coverage of query (166 bits)
1nvbB / P07547 Crystal structure of 3-dehydroquinate synthase (dhqs) in complex with zn2+ and carbaphosphonate (see paper)
36% identity, 85% coverage of query (166 bits)
aroB / CAA05722.1 3-dehydroquinate synthetase from Neisseria gonorrhoeae (see paper)
38% identity, 75% coverage of query (164 bits)
5eksA / V5V8R5 Structure of 3-dehydroquinate synthase from acinetobacter baumannii in complex with NAD
35% identity, 82% coverage of query (163 bits)
Q5NFS1 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
39% identity, 77% coverage of query (161 bits)
AroB / b3389 3-dehydroquinate synthase (EC 4.2.3.4) from Escherichia coli K-12 substr. MG1655 (see 10 papers)
aroB / P07639 3-dehydroquinate synthase (EC 4.2.3.4) from Escherichia coli (strain K12) (see 8 papers)
AROB_ECOLI / P07639 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Escherichia coli (strain K12) (see paper)
P07639 3-dehydroquinate synthase (EC 4.2.3.4) from Escherichia coli (see paper)
37% identity, 81% coverage of query (158 bits)
P9WPX9 3-dehydroquinate synthase (EC 4.2.3.4) from Mycobacterium tuberculosis (see 3 papers)
34% identity, 75% coverage of query (157 bits)
P9WPX9 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
34% identity, 75% coverage of query (157 bits)
ARO1 / P08566 pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (see 3 papers)
ARO1_YEAST / P08566 Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
31% identity, 90% coverage of query (152 bits)
1nrxB / P07547 Crystal structure of 3-dehydroquinate synthase (dhqs) in complex with zn2+ and NAD (see paper)
36% identity, 74% coverage of query (150 bits)
1nrxA / P07547 Crystal structure of 3-dehydroquinate synthase (dhqs) in complex with zn2+ and NAD (see paper)
36% identity, 74% coverage of query (149 bits)
1nvaA Crystal structure of 3-dehydroquinate synthase (dhqs) in complex with zn2+ and adp
34% identity, 74% coverage of query (147 bits)
3qbeA / P9WPX9 Crystal structure of the 3-dehydroquinate synthase (arob) from mycobacterium tuberculosis
33% identity, 75% coverage of query (146 bits)
3qbdA 3-dehydroquinate synthase (arob) from mycobacterium tuberculosis in complex with NAD
35% identity, 70% coverage of query (146 bits)
EVS_STIAD / Q08VU0 2-epi-valiolone synthase; EVS; Sedoheptulose 7-phosphate cyclase; EC 4.2.3.155 from Stigmatella aurantiaca (strain DW4/3-1) (see paper)
Q08VU0 2-epi-valiolone synthase (EC 4.2.3.155) from Stigmatella aurantiaca (see paper)
32% identity, 82% coverage of query (145 bits)
Amir_2000 / C6WFL3 2-epi-valiolone synthase (EC 4.2.3.155) from Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / JCM 3225 / NBRC 14064 / NCIMB 13271 / NRRL B-12336 / IMRU 3971 / 101) (see paper)
EVS_ACTMD / C6WFL3 2-epi-valiolone synthase; EVS; Sedoheptulose 7-phosphate cyclase; EC 4.2.3.155 from Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / JCM 3225 / NBRC 14064 / NCIMB 13271 / NRRL B-12336 / IMRU 3971 / 101) (see paper)
C6WFL3 2-epi-valiolone synthase (EC 4.2.3.155) from Actinosynnema mirum (see paper)
34% identity, 85% coverage of query (145 bits)
EEVS_STIAD / E3FKM2 2-epi-5-epi-valiolone synthase; EEVS; EC 4.2.3.152 from Stigmatella aurantiaca (strain DW4/3-1) (see paper)
33% identity, 77% coverage of query (136 bits)
rifG / G0FS62 aminodehydroquinate synthase from Amycolatopsis mediterranei (strain S699) (see 2 papers)
RIFG_AMYMS / G0FS62 Putative aminodehydroquinate synthase; aDHQS; EC 4.2.3.- from Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei) (see paper)
33% identity, 72% coverage of query (134 bits)
neoC / Q53U19 2-deoxy-scyllo-inosose synthase (EC 4.2.3.124) from Streptomyces fradiae (see 2 papers)
DOIS_STRFR / Q53U19 2-deoxy-scyllo-inosose synthase; DOI synthase; DOIS; EC 4.2.3.124 from Streptomyces fradiae (Streptomyces roseoflavus) (see paper)
31% identity, 75% coverage of query (131 bits)
Build an alignment for Echvi_0121 and 31 homologs with ≥ 30% identity
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2gruB Crystal structure of 2-deoxy-scyllo-inosose synthase complexed with carbaglucose-6-phosphate, NAD+ and co2+
27% identity, 92% coverage of query (124 bits)
2gruA / Q9S5E2 Crystal structure of 2-deoxy-scyllo-inosose synthase complexed with carbaglucose-6-phosphate, NAD+ and co2+ (see paper)
27% identity, 92% coverage of query (122 bits)
btrC / Q9S5E2 2-deoxy-scyllo-inosose synthase (EC 4.2.3.124) from Niallia circulans (see 9 papers)
DOIS_NIACI / Q9S5E2 2-deoxy-scyllo-inosose synthase; DOI synthase; DOIS; EC 4.2.3.124 from Niallia circulans (Bacillus circulans) (see 5 papers)
Q9S5E2 2-deoxy-scyllo-inosose synthase (EC 4.2.3.124) from Niallia circulans (see 14 papers)
27% identity, 92% coverage of query (122 bits)
SALQ_STRA4 / A8D7K2 2-epi-5-epi-valiolone synthase; EEVS; EC 4.2.3.152 from Streptomyces albus (strain ATCC 21838 / DSM 41398 / FERM P-419 / JCM 4703 / NBRC 107858) (see paper)
A8D7K2 2-epi-5-epi-valiolone synthase (EC 4.2.3.152) from Streptomyces albus (see paper)
30% identity, 83% coverage of query (119 bits)
DOIS_MICEC / Q70KD0 2-deoxy-scyllo-inosose synthase; DOI synthase; DOIS; EC 4.2.3.124 from Micromonospora echinospora (Micromonospora purpurea) (see paper)
gtmA / CAE06511.1 2-deoxy-scyllo-inosose synthase from Micromonospora echinospora (see paper)
31% identity, 88% coverage of query (116 bits)
hygC / Q2MFR5 2-deoxy-scyllo-inosose synthase (EC 4.2.3.124) from Streptomyces hygroscopicus subsp. hygroscopicus (see paper)
28% identity, 77% coverage of query (114 bits)
ACBC_ACTS5 / Q9ZAE9 2-epi-5-epi-valiolone synthase; EEVS; C7-cyclitol synthase; Sedoheptulose 7-phosphate cyclase; EC 4.2.3.152 from Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) (see paper)
Q9ZAE9 2-epi-5-epi-valiolone synthase (EC 4.2.3.152) from Actinoplanes sp. (see paper)
29% identity, 73% coverage of query (107 bits)
acbC / CAA77208.2 2-epi-5-epi-valiolone synthase AcbC from Actinoplanes sp. SE50/110 (see 5 papers)
29% identity, 73% coverage of query (107 bits)
Nos2 / B2J6X9 desmethyl-4-deoxygadusol synthase (EC 4.2.3.154) from Nostoc punctiforme (strain ATCC 29133 / PCC 73102) (see 2 papers)
DDGS_NOSP7 / B2J6X9 Demethyl-4-deoxygadusol synthase; DDGS; EC 4.2.3.154 from Nostoc punctiforme (strain ATCC 29133 / PCC 73102) (see 2 papers)
29% identity, 77% coverage of query (107 bits)
DOIS_STRSD / Q2MF16 2-deoxy-scyllo-inosose synthase; DOI synthase; DOIS; EC 4.2.3.124 from Streptoalloteichus tenebrarius (strain ATCC 17920 / DSM 40477 / JCM 4838 / CBS 697.72 / NBRC 16175 / NCIMB 11028 / NRRL B-12390 / A12253. 1) (Streptomyces tenebrarius) (see paper)
Q2MF16 2-deoxy-scyllo-inosose synthase (EC 4.2.3.124) from Streptoalloteichus tenebrarius (see paper)
tbmA / CAE22471.1 2-deoxy-scyllo-inosose synthase from Streptoalloteichus tenebrarius (see paper)
30% identity, 73% coverage of query (105 bits)
5tprA / Q3M6C3 Desmethyl-4-deoxygadusol synthase from anabaena variabilis (ava_3858) with NAD+ and zn2+ bound (see paper)
25% identity, 88% coverage of query (100 bits)
DDGS_TRIV2 / Q3M6C3 Demethyl-4-deoxygadusol synthase; DDGS; EC 4.2.3.154 from Trichormus variabilis (strain ATCC 29413 / PCC 7937) (Anabaena variabilis) (see 2 papers)
Q3M6C3 demethyl-4-deoxygadusol synthase (EC 4.2.3.154) from Trichormus variabilis (see paper)
25% identity, 88% coverage of query (100 bits)
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Lawrence Berkeley National Laboratory