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Searching for up to 100 curated homologs for Echvi_0158 FitnessBrowser__Cola:Echvi_0158 (390 a.a.)

Found high-coverage hits (≥70%) to 7 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

agaS / A0KYQ7 D-galactosamine-6-phosphate deaminase/isomerase from Shewanella sp. (strain ANA-3) (see paper)
AGAS_SHESA / A0KYQ7 D-galactosamine-6-phosphate deaminase AgaS; GalN-6-P deaminase; Glucosamine-6-phosphate deaminase; GlcN-6-P deaminase; EC 3.5.99.-; EC 3.5.99.6 from Shewanella sp. (strain ANA-3) (see paper)
    40% identity, 98% coverage of query (283 bits)

YraB / b3136 putative galactosamine-6-phosphate deaminase/isomerase from Escherichia coli K-12 substr. MG1655 (see 8 papers)
    40% identity, 94% coverage of query (250 bits)

AGAS_ECOLX / Q9KIP9 D-galactosamine-6-phosphate deaminase AgaS; Gam-6-P deaminase/isomerase; EC 3.5.99.- from Escherichia coli (see paper)
    39% identity, 94% coverage of query (249 bits)

agaS / Q8XAC2 D-galactosamine-6-phosphate deaminase/isomerase from Escherichia coli O157:H7 (see paper)
AGAS_ECO57 / Q8XAC2 D-galactosamine-6-phosphate deaminase AgaS; Gam-6-P deaminase/isomerase; EC 3.5.99.- from Escherichia coli O157:H7 (see paper)
    39% identity, 94% coverage of query (248 bits)

Build an alignment

Build an alignment for Echvi_0158 and 4 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

glmD / Q5JDU3 archaeal glucosamine-6-phosphate deaminase subunit (EC 3.5.99.6) from Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (see paper)
GLMD_THEKO / Q5JDU3 Glucosamine-6-phosphate deaminase; GlcN6P deaminase; EC 3.5.99.6 from Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1)) (see paper)
    29% identity, 93% coverage of query (100 bits)

2df8A / O58246 Crystal structure of the ph0510 protein from pyrococcus horikoshii ot3 in complex with beta-d-fructopyranose-1-phosphate
    28% identity, 82% coverage of query (83.6 bits)

glmS / F9VPA4 glutamine—fructose-6-phosphate transaminase (EC 2.6.1.16) from Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) (see paper)
GLMS_SULTO / F9VPA4 Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Glutamine:fructose-6-phosphate amidotransferase; Hexosephosphate aminotransferase; L-glutamine--D-fructose-6-phosphate amidotransferase; EC 2.6.1.16 from Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) (Sulfolobus tokodaii) (see paper)
    22% identity, 93% coverage of query (45.8 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory