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Searching for up to 100 curated homologs for Echvi_1073 FitnessBrowser__Cola:Echvi_1073 (599 a.a.)

Found high-coverage hits (≥70%) to 14 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

2z1qB / Q5SJW0 Crystal structure of acyl coa dehydrogenase
    47% identity, 98% coverage of query (529 bits)

FADE_BACSU / O32176 Probable acyl-CoA dehydrogenase; EC 1.3.99.- from Bacillus subtilis (strain 168) (see paper)
    44% identity, 98% coverage of query (519 bits)

3owaC / A0A6H3ADM7 Crystal structure of acyl-coa dehydrogenase complexed with fad from bacillus anthracis
    46% identity, 98% coverage of query (518 bits)

8pheA / Q9H845 Acad9-wt in complex with ecsit-cter (see paper)
    37% identity, 91% coverage of query (322 bits)

8phfA Cryo-em structure of human acad9-s191a
    37% identity, 91% coverage of query (321 bits)

ACAD9_HUMAN / Q9H845 Complex I assembly factor ACAD9, mitochondrial; Acyl-CoA dehydrogenase family member 9; ACAD-9; EC 1.3.8.- from Homo sapiens (Human) (see 14 papers)
    36% identity, 91% coverage of query (317 bits)

ACAD9_RAT / B1WC61 Complex I assembly factor ACAD9, mitochondrial; Acyl-CoA dehydrogenase family member 9; ACAD-9; EC 1.3.8.- from Rattus norvegicus (Rat) (see paper)
    36% identity, 91% coverage of query (317 bits)

ACADV_RAT / P45953 Very long-chain specific acyl-CoA dehydrogenase, mitochondrial; VLCAD; EC 1.3.8.9 from Rattus norvegicus (Rat) (see 2 papers)
    36% identity, 84% coverage of query (311 bits)

2uxwA Crystal structure of human very long chain acyl-coa dehydrogenase (acadvl)
    36% identity, 84% coverage of query (305 bits)

3b96A Structural basis for substrate fatty-acyl chain specificity: crystal structure of human very-long-chain acyl-coa dehydrogenase
    36% identity, 84% coverage of query (300 bits)

ACADV_MOUSE / P50544 Very long-chain specific acyl-CoA dehydrogenase, mitochondrial; MVLCAD; VLCAD; EC 1.3.8.9 from Mus musculus (Mouse) (see paper)
P50544 very-long-chain acyl-CoA dehydrogenase (EC 1.3.8.9) from Mus musculus (see 2 papers)
    34% identity, 92% coverage of query (298 bits)

8ca1B / P50544 Cryo-em structure of the acadvl dimer from mus musculus. (see paper)
    34% identity, 92% coverage of query (298 bits)

7s7gA / P49748 Crystal structure analysis of human vlcad
    36% identity, 84% coverage of query (298 bits)

ACADVL / P49748 very-long-chain acyl-CoA dehydrogenase monomer (EC 1.3.8.9) from Homo sapiens (see 12 papers)
ACADV_HUMAN / P49748 Very long-chain specific acyl-CoA dehydrogenase, mitochondrial; VLCAD; EC 1.3.8.9 from Homo sapiens (Human) (see 12 papers)
P49748 long-chain acyl-CoA dehydrogenase (EC 1.3.8.8); very-long-chain acyl-CoA dehydrogenase (EC 1.3.8.9) from Homo sapiens (see 6 papers)
    35% identity, 84% coverage of query (294 bits)

Build an alignment

Build an alignment for Echvi_1073 and 14 homologs with ≥ 30% identity

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory