Searching for up to 100 curated homologs for Echvi_1569 FitnessBrowser__Cola:Echvi_1569 (245 a.a.)
Found high-coverage hits (≥70%) to 21 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
BPHYT_RS26975 L-lactate dehydrogenase, LldE subunit from Burkholderia phytofirmans PsJN
51% identity, 97% coverage of query (251 bits)
lldE / Q8EGS4 L-lactate dehydrogenase LldE subunit (EC 1.1.2.3) from Shewanella oneidensis (strain MR-1) (see paper)
46% identity, 97% coverage of query (220 bits)
lutA / O07020 iron-sulfur oxidase subunit used in L-lactate utilization (EC 1.1.1.27) from Bacillus subtilis (strain 168) (see 2 papers)
LUTA_BACSU / O07020 Lactate utilization protein A from Bacillus subtilis (strain 168) (see paper)
42% identity, 96% coverage of query (190 bits)
LUTA_BACCR / Q81GA5 Lactate utilization protein A from Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) (see paper)
40% identity, 96% coverage of query (175 bits)
YkgE / b0306 putative lactate utilization oxidoreductase YkgE from Escherichia coli K-12 substr. MG1655 (see 3 papers)
35% identity, 96% coverage of query (139 bits)
HP15_4088 L-lactate dehydrogenase, LutA subunit from Marinobacter adhaerens HP15
34% identity, 97% coverage of query (136 bits)
RR42_RS21295 L-lactate dehydrogenase, LutA subunit from Cupriavidus basilensis FW507-4G11
33% identity, 96% coverage of query (131 bits)
Q5F885 L-lactate dehydrogenase (subunit 3/3) (EC 1.1.1.27) from Neisseria gonorrhoeae (see paper)
33% identity, 95% coverage of query (114 bits)
Build an alignment for Echvi_1569 and 8 homologs with ≥ 30% identity
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DVU_3033 / Q726S3 quinone-dependent L-lactate dehydrogenase large subunit (EC 1.1.2.3) from Desulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / NCIMB 8303 / VKM B-1760 / Hildenborough) (see 4 papers)
28% identity, 97% coverage of query (103 bits)
DVU_3028 / Q726S8 quinone-dependent D-lactate dehydrogenase iron-sulfur subunit (EC 1.1.2.5) from Desulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / NCIMB 8303 / VKM B-1760 / Hildenborough) (see 3 papers)
27% identity, 96% coverage of query (91.7 bits)
TFRB_METTM / D9PUX5 Fumarate reductase (CoM/CoB) subunit B; Thiol:fumarate reductase subunit B; EC 1.3.4.1 from Methanothermobacter marburgensis (strain ATCC BAA-927 / DSM 2133 / JCM 14651 / NBRC 100331 / OCM 82 / Marburg) (Methanobacterium thermoautotrophicum) (see 2 papers)
25% identity, 96% coverage of query (72.0 bits)
hdrD / P96797 CoB-CoM heterodisulfide reductase catalytic subunit D (EC 1.8.98.1) from Methanosarcina barkeri (strain Fusaro / DSM 804) (see 2 papers)
HDRD_METBF / P96797 Dihydromethanophenazine:CoB--CoM heterodisulfide reductase subunit D; CoB--CoM heterodisulfide reductase iron-sulfur subunit D; Coenzyme B:coenzyme M:methanophenazine oxidoreductase subunit D; EC 1.8.98.1 from Methanosarcina barkeri (strain Fusaro / DSM 804) (see 2 papers)
TC 3.D.7.1.1 / P96797 HDRD, component of H2:heterodisulfide oxidoreductase, HHO. Two protons are consumed in the cytoplasm while two protons are released in the periplasm, contributing to the pmf from Methanosarcina barkeri (see 3 papers)
hdrD / GB|AAZ70545.1 CoB--CoM heterodisulfide reductase iron-sulfur subunit D; EC 1.8.98.1 from Methanosarcina barkeri str. Fusaro (see 3 papers)
25% identity, 89% coverage of query (65.1 bits)
SMc00926 D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Sinorhizobium meliloti 1021
22% identity, 96% coverage of query (57.4 bits)
RR42_RS17315 D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Cupriavidus basilensis FW507-4G11
22% identity, 95% coverage of query (54.3 bits)
GlpC / b2243 anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
glpC / P0A996 anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3) from Escherichia coli (strain K12) (see 4 papers)
24% identity, 74% coverage of query (53.1 bits)
BPHYT_RS03150 Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans PsJN
25% identity, 82% coverage of query (51.6 bits)
PGA1_c29700 D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Phaeobacter inhibens BS107
21% identity, 96% coverage of query (51.6 bits)
Psest_3839 D-lactate/glycolate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6; EC 1.1.99.14) from Pseudomonas stutzeri RCH2
20% identity, 96% coverage of query (51.6 bits)
HDRD_METMA / Q8PVW3 Dihydromethanophenazine:CoB--CoM heterodisulfide reductase subunit D; CoB--CoM heterodisulfide reductase iron-sulfur subunit D; Coenzyme B:coenzyme M:methanophenazine oxidoreductase subunit D; EC 1.8.98.1 from Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) (Methanosarcina frisia) (see paper)
25% identity, 76% coverage of query (51.2 bits)
HSERO_RS19500 Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae SmR1
24% identity, 87% coverage of query (50.8 bits)
HDRD_METTT / A0A0E3NEE1 Dihydromethanophenazine:CoB--CoM heterodisulfide reductase subunit D; CoB--CoM heterodisulfide reductase iron-sulfur subunit D; Coenzyme B:coenzyme M:methanophenazine oxidoreductase subunit D; EC 1.8.98.1 from Methanosarcina thermophila (strain ATCC 43570 / DSM 1825 / OCM 12 / VKM B-1830 / TM-1) (see 3 papers)
24% identity, 76% coverage of query (46.6 bits)
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Lawrence Berkeley National Laboratory