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Searching for up to 100 curated homologs for Echvi_1573 FitnessBrowser__Cola:Echvi_1573 (427 a.a.)

Found high-coverage hits (≥70%) to 15 curated proteins.

Removed hits that are identical to the query, leaving 14

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Q75WH8 L-rhamnose isomerase (EC 5.3.1.14) from Pseudomonas stutzeri (see 6 papers)
    54% identity, 100% coverage of query (473 bits)

2hcvA Crystal structure of l-rhamnose isomerase from pseudomonas stutzeri with metal ion
    54% identity, 99% coverage of query (471 bits)

3iudA Cu2+-bound form of pseudomonas stutzeri l-rhamnose isomerase
    54% identity, 98% coverage of query (470 bits)

2i57A Crystal structure of l-rhamnose isomerase from pseudomonas stutzeri in complex with d-allose
    54% identity, 98% coverage of query (470 bits)

3iuhA Co2+-bound form of pseudomonas stutzeri l-rhamnose isomerase
    54% identity, 98% coverage of query (470 bits)

SMc02321 L-rhamnose isomerase (EC 5.3.1.14) from Sinorhizobium meliloti 1021
    54% identity, 95% coverage of query (469 bits)

3itoA Crystal structure of pseudomonas stutzeri l-rhamnose isomerase mutant d327n in complex with d-psicose
    53% identity, 99% coverage of query (469 bits)

3itlA Crystal structure of pseudomonas stutzeri l-rhamnose isomerase mutant d327n in complex with l-rhamnulose
    53% identity, 99% coverage of query (469 bits)

3itvA Crystal structure of pseudomonas stutzeri l-rhamnose isomerase mutant s329k in complex with d-psicose
    53% identity, 99% coverage of query (469 bits)

3m0vC / Q75WH8 Crystal structure of pseudomonas stutzeri l-rhamnose isomerase mutant s329l in complex with l-rhamnose (see paper)
    53% identity, 99% coverage of query (468 bits)

4gjjB Crystal structure of pseudomonas stutzeri l-rhamnose isomerase mutant h101n in complex with d-allopyranose
    53% identity, 99% coverage of query (468 bits)

4gjiB Crystal structure of pseudomonas stutzeri l-rhamnose isomerase mutant h101n in complex with l-rhamnopyranose
    53% identity, 99% coverage of query (468 bits)

HSERO_RS22240 L-rhamnose isomerase (EC 5.3.1.14) from Herbaspirillum seropedicae SmR1
    52% identity, 100% coverage of query (451 bits)

B8E1U6 L-rhamnose isomerase (EC 5.3.1.14) from Dictyoglomus turgidum (see paper)
    44% identity, 95% coverage of query (357 bits)

Build an alignment

Build an alignment for Echvi_1573 and 14 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory