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Searching for up to 100 curated homologs for Echvi_1808 FitnessBrowser__Cola:Echvi_1808 (330 a.a.)

Found high-coverage hits (≥70%) to 13 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

gadh2 / Q4KKM6 D-gluconate dehydrogenase cytochrome c subunit (EC 1.1.99.3) from Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) (see paper)
    31% identity, 82% coverage of query (93.6 bits)

Build an alignment

Build an alignment for Echvi_1808 and 1 homologs with ≥ 30% identity

Select sequences

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Additional hits (identity < 30%)

A0A2H4PJM7 gluconate 2-dehydrogenase (subunit 1/3) (EC 1.1.1.215) from Pseudomonas plecoglossicida (see paper)
    29% identity, 81% coverage of query (88.2 bits)

gadh2 / O34215 gluconate 2-dehydrogenase cytochrome c subunit (EC 1.1.99.3) from Pantoea cypripedii (see paper)
GADH2_PANCY / O34215 Gluconate 2-dehydrogenase cytochrome c subunit; GA 2-DH cytochrome c subunit; GADH cytochrome c subunit; EC 1.1.99.3 from Pantoea cypripedii (Pectobacterium cypripedii) (Erwinia cypripedii) (see paper)
    30% identity, 80% coverage of query (87.8 bits)

Q5FRK5 gluconate 2-dehydrogenase (EC 1.1.1.215) from Gluconobacter oxydans (see paper)
    29% identity, 81% coverage of query (82.8 bits)

D2SZY5 alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus (see paper)
    27% identity, 89% coverage of query (82.8 bits)

C7G3B8 alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus (see paper)
    27% identity, 89% coverage of query (82.0 bits)

C9K502 alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus (see paper)
    27% identity, 89% coverage of query (80.9 bits)

ADHB_GLUPO / P0A388 Alcohol dehydrogenase (quinone), cytochrome c subunit; ADH; Alcohol dehydrogenase (quinone), subunit II; Cytochrome c-553; Cytochrome c553; Ethanol:Q2 reductase; G3-ADH subunit II; Quinohemoprotein-cytochrome c complex; Ubiquinol oxidase; EC 1.1.5.5 from Gluconacetobacter polyoxogenes (Acetobacter polyoxogenes) (see paper)
    29% identity, 82% coverage of query (79.7 bits)

PP_3623 vanillin dehydrogenase, cytochrome c component from Pseudomonas putida KT2440
    28% identity, 91% coverage of query (77.8 bits)

7w2jC / M1V1V5 Cryo-em structure of membrane-bound fructose dehydrogenase from gluconobacter japonicus
    29% identity, 80% coverage of query (75.1 bits)

fdhC / M1V1V5 fructose dehydrogenase cytochrome subunit (EC 1.1.5.14) from Gluconobacter japonicus (see 4 papers)
FDHC_GLUJA / M1V1V5 Fructose dehydrogenase cytochrome subunit; Fructose dehydrogenase subunit II from Gluconobacter japonicus (see 2 papers)
fdhC / BAM93251.1 cytochrome subunit of fructose dehydrogenase from Gluconobacter japonicus (see 2 papers)
    29% identity, 80% coverage of query (75.1 bits)

8jejC Cryo-em structure of na-dithionite reduced membrane-bound fructose dehydrogenase from gluconobacter japonicus
    29% identity, 80% coverage of query (75.1 bits)

A0A0B6VQJ4 dehydrogluconate dehydrogenase (subunit 3/3) (EC 1.1.99.4) from Gluconobacter oxydans (see paper)
    27% identity, 87% coverage of query (69.3 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory