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Searching for up to 100 curated homologs for Echvi_1875 FitnessBrowser__Cola:Echvi_1875 (496 a.a.)

Found high-coverage hits (≥70%) to 34 curated proteins.

Removed hits that are identical to the query, leaving 33

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

BT0792 xylulokinase (EC 2.7.1.17) from Bacteroides thetaiotaomicron VPI-5482
    56% identity, 99% coverage of query (566 bits)

C7NMH3 xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis (see paper)
    32% identity, 98% coverage of query (218 bits)

Build an alignment

Build an alignment for Echvi_1875 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

Q9WXX1 xylulokinase (EC 2.7.1.17) from Thermotoga maritima (see paper)
    29% identity, 99% coverage of query (202 bits)

mtlY / Q4KC52 xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) (see paper)
    28% identity, 82% coverage of query (175 bits)

XylB / b3564 xylulokinase (EC 2.7.1.17) from Escherichia coli K-12 substr. MG1655 (see 9 papers)
xylB / P09099 xylulokinase (EC 2.7.1.17) from Escherichia coli (strain K12) (see 8 papers)
XYLB_ECOLI / P09099 Xylulose kinase; XK; Xylulokinase; 1-deoxy-D-xylulokinase; EC 2.7.1.17; EC 2.7.1.- from Escherichia coli (strain K12) (see 2 papers)
xylB / GB|AAC76588.1 xylulokinase; EC 2.7.1.17 from Escherichia coli K12 (see paper)
    28% identity, 98% coverage of query (174 bits)

AO356_27695 Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens FW300-N2C3
    29% identity, 99% coverage of query (173 bits)

2itmA / P09099 Crystal structure of the e. Coli xylulose kinase complexed with xylulose (see paper)
    28% identity, 98% coverage of query (167 bits)

Pf6N2E2_805 Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens FW300-N2E2
    31% identity, 82% coverage of query (166 bits)

SMc03164 Xylulose kinase (EC 2.7.1.17) from Sinorhizobium meliloti 1021
    28% identity, 99% coverage of query (165 bits)

BWI76_RS27020 Xylulose kinase (EC 2.7.1.17) from Klebsiella michiganensis M5al
    28% identity, 98% coverage of query (161 bits)

XYLB_LEVBR / P35850 Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Levilactobacillus brevis (Lactobacillus brevis) (see paper)
    28% identity, 98% coverage of query (138 bits)

3i8bA / A1A0I0 The crystal structure of xylulose kinase from bifidobacterium adolescentis
    25% identity, 82% coverage of query (127 bits)

Q8NU35 xylulokinase (EC 2.7.1.17) from Corynebacterium glutamicum (see paper)
    26% identity, 78% coverage of query (122 bits)

XylK / b3580 L-xylulose kinase (EC 2.7.1.53) from Escherichia coli K-12 substr. MG1655 (see 6 papers)
lyxK / P37677 L-xylulose kinase (EC 2.7.1.53) from Escherichia coli (strain K12) (see 5 papers)
LYXK_ECOLI / P37677 L-xylulose/3-keto-L-gulonate kinase; L-xylulokinase; 3-dehydro-L-gulonate kinase; EC 2.7.1.-; EC 2.7.1.53 from Escherichia coli (strain K12) (see 2 papers)
    26% identity, 100% coverage of query (120 bits)

PGA1_c14010 Xylulose kinase (EC 2.7.1.17) from Phaeobacter inhibens BS107
    28% identity, 82% coverage of query (120 bits)

3ll3B The crystal structure of ligand bound xylulose kinase from lactobacillus acidophilus
    26% identity, 98% coverage of query (110 bits)

3ll3A / Q5FM28 The crystal structure of ligand bound xylulose kinase from lactobacillus acidophilus
    26% identity, 98% coverage of query (109 bits)

GLPK_THEKO / O93623 Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1)) (see 2 papers)
O93623 glycerol kinase (EC 2.7.1.30) from Thermococcus kodakarensis (see 2 papers)
    25% identity, 100% coverage of query (102 bits)

6k76A / O93623 Glycerol kinase form thermococcus kodakarensis, complex structure with substrate.
    24% identity, 99% coverage of query (90.9 bits)

YdeV / b1511 autoinducer-2 kinase (EC 2.7.1.189) from Escherichia coli K-12 substr. MG1655 (see 18 papers)
lsrK / P77432 autoinducer-2 kinase (EC 2.7.1.189) from Escherichia coli (strain K12) (see 25 papers)
LSRK_ECOLI / P77432 Autoinducer-2 kinase; AI-2 kinase; EC 2.7.1.189 from Escherichia coli (strain K12) (see 3 papers)
P77432 autoinducer-2 kinase (EC 2.7.1.189) from Escherichia coli (see 2 papers)
lsrK / RF|NP_416028 autoinducer 2 kinase lsrK from Escherichia coli K12 (see 3 papers)
    23% identity, 98% coverage of query (80.5 bits)

GLPK_HALVD / D4GYI5 Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; EC 2.7.1.30 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see 2 papers)
    23% identity, 76% coverage of query (76.3 bits)

5ya2A Crystal structure of lsrk-hpr complex with adp
    23% identity, 97% coverage of query (75.9 bits)

5ya1A / P77432 Crystal structure of lsrk-hpr complex with atp (see paper)
    23% identity, 97% coverage of query (74.3 bits)

3kzbA / Q7NWW7 Crystal structure of xylulokinase from chromobacterium violaceum
    25% identity, 70% coverage of query (73.9 bits)

3l0qA / Q665C6 The crystal structure of xlylulose kinase from yersinia pseudotuberculosis
    23% identity, 99% coverage of query (67.4 bits)

FucK / b2803 L-fuculokinase (EC 2.7.1.51) from Escherichia coli K-12 substr. MG1655 (see 7 papers)
fucK / P11553 L-fuculokinase (EC 2.7.1.51) from Escherichia coli (strain K12) (see 6 papers)
FUCK_ECOLI / P11553 L-fuculokinase; L-fuculose kinase; EC 2.7.1.51 from Escherichia coli (strain K12) (see 3 papers)
    23% identity, 93% coverage of query (66.6 bits)

GLPK_MOUSE / Q64516 Glycerol kinase; Glycerokinase; ATP:glycerol 3-phosphotransferase; EC 2.7.1.30 from Mus musculus (Mouse) (see 2 papers)
    23% identity, 77% coverage of query (65.9 bits)

GLPK_RAT / Q63060 Glycerol kinase; Glycerokinase; ATP-stimulated glucocorticoid-receptor translocation promoter; ASTP; ATP:glycerol 3-phosphotransferase; EC 2.7.1.30 from Rattus norvegicus (Rat) (see paper)
    23% identity, 77% coverage of query (65.5 bits)

GLPK_HUMAN / P32189 Glycerol kinase; Glycerokinase; ATP:glycerol 3-phosphotransferase; EC 2.7.1.30 from Homo sapiens (Human) (see 5 papers)
    23% identity, 77% coverage of query (65.5 bits)

6udeB / A0A077EJ65 Crystal structure of glycerol kinase from elizabethkingia anophelis nuhp1 in complex with adp and glycerol
    25% identity, 80% coverage of query (63.2 bits)

LSRK_SALTY / Q8ZKQ6 Autoinducer-2 kinase; AI-2 kinase; EC 2.7.1.189 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 3 papers)
Q8ZKQ6 autoinducer-2 kinase (EC 2.7.1.189) from Salmonella enterica subsp. enterica serovar Typhimurium (see 2 papers)
    22% identity, 98% coverage of query (63.2 bits)

D0VZG4 glycerol kinase (EC 2.7.1.30) from Cellulomonas sp. (see paper)
    22% identity, 100% coverage of query (62.8 bits)

Q0IID9 glycerol kinase (EC 2.7.1.30) from Bos taurus (see paper)
    23% identity, 77% coverage of query (60.8 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory