Sites on a Tree

 

Searching for up to 100 curated homologs for Echvi_2293 FitnessBrowser__Cola:Echvi_2293 (473 a.a.)

Found high-coverage hits (≥70%) to 5 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

3tp9A / C8WS08 Crystal structure of alicyclobacillus acidocaldarius protein with beta-lactamase and rhodanese domains
    35% identity, 96% coverage of query (258 bits)

G5ELA4 persulfide dioxygenase (EC 1.13.11.18) from Staphylococcus aureus (see paper)
    32% identity, 97% coverage of query (221 bits)

3r2uA / A0A0H2X0Y8 2.1 angstrom resolution crystal structure of metallo-beta-lactamase from staphylococcus aureus subsp. Aureus col
    35% identity, 73% coverage of query (199 bits)

3r2uB 2.1 angstrom resolution crystal structure of metallo-beta-lactamase from staphylococcus aureus subsp. Aureus col
    34% identity, 73% coverage of query (182 bits)

Build an alignment

Build an alignment for Echvi_2293 and 4 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

5ve5A / B2TEQ2 Crystal structure of persulfide dioxygenase rhodanese fusion protein with rhodanese domain inactivating mutation (c314s) from burkholderia phytofirmans in complex with glutathione (see paper)
    26% identity, 71% coverage of query (85.1 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory