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Searching for up to 100 curated homologs for Echvi_2799 FitnessBrowser__Cola:Echvi_2799 (356 a.a.)

Found high-coverage hits (≥70%) to 4 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

orr / C1FW08 ornithine racemase monomer (EC 5.1.1.10) from Acetoanaerobium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / CCUG 9281 / NCIMB 10654 / HF) (see 2 papers)
ORR_ACESD / C1FW08 Ornithine racemase; OR; EC 5.1.1.12 from Acetoanaerobium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / CCUG 9281 / NCIMB 10654 / HF) (Clostridium sticklandii) (see 2 papers)
orr / CAQ42981.1 ornithine racemase from Acetoanaerobium sticklandii DSM 519 (see paper)
    39% identity, 97% coverage of query (215 bits)

Q8ZNC6 ornithine racemase (EC 5.1.1.12) from Salmonella enterica subsp. enterica serovar Typhimurium (see paper)
    31% identity, 99% coverage of query (159 bits)

Build an alignment

Build an alignment for Echvi_2799 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

sfnaC / Q2FW73 ornithine racemase (EC 5.1.1.10) from Staphylococcus aureus (strain NCTC 8325 / PS 47) (see paper)
    29% identity, 95% coverage of query (156 bits)

TM_1597 / Q9X1T3 lysine racemase monomer (EC 5.1.1.10) from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) (see 4 papers)
LYSRA_THEMA / Q9X1T3 Lysine racemase; Lys racemase; Ornithine racemase; EC 5.1.1.5; EC 5.1.1.12 from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) (see paper)
    28% identity, 96% coverage of query (141 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory