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Searching for up to 100 curated homologs for Echvi_4514 FitnessBrowser__Cola:Echvi_4514 (557 a.a.)

Found high-coverage hits (≥70%) to 28 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Echvi_0515 Ribulokinase (EC 2.7.1.16) from Echinicola vietnamensis KMM 6221, DSM 17526
    53% identity, 99% coverage of query (612 bits)

CA265_RS08625 Ribulokinase (EC 2.7.1.16) from Pedobacter sp. GW460-11-11-14-LB5
    47% identity, 99% coverage of query (504 bits)

AraB / b0063 ribulokinase (EC 2.7.1.16) from Escherichia coli K-12 substr. MG1655 (see 7 papers)
araB / P08204 ribulokinase (EC 2.7.1.16) from Escherichia coli (strain K12) (see 7 papers)
ARAB_ECOLI / P08204 Ribulokinase; EC 2.7.1.16 from Escherichia coli (strain K12) (see 2 papers)
araB ribulokinase; EC 2.7.1.16 from Escherichia coli (see 3 papers)
    42% identity, 99% coverage of query (453 bits)

Q9KBQ3 ribulokinase (EC 2.7.1.16) from Alkalihalobacillus halodurans (see paper)
    36% identity, 97% coverage of query (327 bits)

3qdkA / Q9KBQ3 Structural insight on mechanism and diverse substrate selection strategy of ribulokinase (see paper)
    36% identity, 97% coverage of query (314 bits)

ARAB_BACSU / P94524 Ribulokinase; EC 2.7.1.16 from Bacillus subtilis (strain 168) (see paper)
    35% identity, 99% coverage of query (312 bits)

Build an alignment

Build an alignment for Echvi_4514 and 6 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

3l0qA / Q665C6 The crystal structure of xlylulose kinase from yersinia pseudotuberculosis
    26% identity, 97% coverage of query (141 bits)

FGGY / Q96C11 FGGY carbohydrate kinase domain-containing protein (EC 2.7.1.47) from Homo sapiens (see paper)
FGGY_HUMAN / Q96C11 FGGY carbohydrate kinase domain-containing protein; D-ribulokinase FGGY; EC 2.7.1.47 from Homo sapiens (Human) (see 2 papers)
Q96C11 D-ribulokinase (EC 2.7.1.47) from Homo sapiens (see paper)
    27% identity, 97% coverage of query (124 bits)

C7NMH3 xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis (see paper)
    28% identity, 96% coverage of query (124 bits)

YDR109C / Q04585 D-ribulokinase (EC 2.7.1.47) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (see 2 papers)
YDR09_YEAST / Q04585 D-ribulokinase YDR109C; EC 2.7.1.47 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
Q04585 D-ribulokinase (EC 2.7.1.47) from Saccharomyces cerevisiae (see paper)
    25% identity, 90% coverage of query (102 bits)

XYLB_LEVBR / P35850 Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Levilactobacillus brevis (Lactobacillus brevis) (see paper)
    23% identity, 97% coverage of query (91.3 bits)

Q9WXX1 xylulokinase (EC 2.7.1.17) from Thermotoga maritima (see paper)
    25% identity, 99% coverage of query (87.8 bits)

5ya2A Crystal structure of lsrk-hpr complex with adp
    21% identity, 96% coverage of query (72.8 bits)

5ya1A / P77432 Crystal structure of lsrk-hpr complex with atp (see paper)
    21% identity, 96% coverage of query (71.2 bits)

YdeV / b1511 autoinducer-2 kinase (EC 2.7.1.189) from Escherichia coli K-12 substr. MG1655 (see 18 papers)
lsrK / P77432 autoinducer-2 kinase (EC 2.7.1.189) from Escherichia coli (strain K12) (see 25 papers)
LSRK_ECOLI / P77432 Autoinducer-2 kinase; AI-2 kinase; EC 2.7.1.189 from Escherichia coli (strain K12) (see 3 papers)
P77432 autoinducer-2 kinase (EC 2.7.1.189) from Escherichia coli (see 2 papers)
lsrK / RF|NP_416028 autoinducer 2 kinase lsrK from Escherichia coli K12 (see 3 papers)
    21% identity, 97% coverage of query (70.1 bits)

GLPK_THEKO / O93623 Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1)) (see 2 papers)
O93623 glycerol kinase (EC 2.7.1.30) from Thermococcus kodakarensis (see 2 papers)
    22% identity, 95% coverage of query (67.0 bits)

SMc03164 Xylulose kinase (EC 2.7.1.17) from Sinorhizobium meliloti 1021
    22% identity, 97% coverage of query (66.6 bits)

AO356_27695 Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens FW300-N2C3
    20% identity, 86% coverage of query (65.9 bits)

PGA1_c14010 Xylulose kinase (EC 2.7.1.17) from Phaeobacter inhibens BS107
    22% identity, 97% coverage of query (63.2 bits)

mtlY / Q4KC52 xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) (see paper)
    22% identity, 86% coverage of query (62.0 bits)

YgcE / b2776 putative sugar kinase YgcE from Escherichia coli K-12 substr. MG1655
    21% identity, 95% coverage of query (61.2 bits)

BT0792 xylulokinase (EC 2.7.1.17) from Bacteroides thetaiotaomicron VPI-5482
    22% identity, 97% coverage of query (60.1 bits)

6k76A / O93623 Glycerol kinase form thermococcus kodakarensis, complex structure with substrate.
    22% identity, 95% coverage of query (58.9 bits)

XylK / b3580 L-xylulose kinase (EC 2.7.1.53) from Escherichia coli K-12 substr. MG1655 (see 6 papers)
lyxK / P37677 L-xylulose kinase (EC 2.7.1.53) from Escherichia coli (strain K12) (see 5 papers)
LYXK_ECOLI / P37677 L-xylulose/3-keto-L-gulonate kinase; L-xylulokinase; 3-dehydro-L-gulonate kinase; EC 2.7.1.-; EC 2.7.1.53 from Escherichia coli (strain K12) (see 2 papers)
    21% identity, 86% coverage of query (55.8 bits)

3ll3A / Q5FM28 The crystal structure of ligand bound xylulose kinase from lactobacillus acidophilus
    21% identity, 97% coverage of query (53.5 bits)

FucK / b2803 L-fuculokinase (EC 2.7.1.51) from Escherichia coli K-12 substr. MG1655 (see 7 papers)
fucK / P11553 L-fuculokinase (EC 2.7.1.51) from Escherichia coli (strain K12) (see 6 papers)
FUCK_ECOLI / P11553 L-fuculokinase; L-fuculose kinase; EC 2.7.1.51 from Escherichia coli (strain K12) (see 3 papers)
    21% identity, 94% coverage of query (53.1 bits)

3ll3B The crystal structure of ligand bound xylulose kinase from lactobacillus acidophilus
    20% identity, 97% coverage of query (50.1 bits)

XylB / b3564 xylulokinase (EC 2.7.1.17) from Escherichia coli K-12 substr. MG1655 (see 9 papers)
xylB / P09099 xylulokinase (EC 2.7.1.17) from Escherichia coli (strain K12) (see 8 papers)
XYLB_ECOLI / P09099 Xylulose kinase; XK; Xylulokinase; 1-deoxy-D-xylulokinase; EC 2.7.1.17; EC 2.7.1.- from Escherichia coli (strain K12) (see 2 papers)
xylB / GB|AAC76588.1 xylulokinase; EC 2.7.1.17 from Escherichia coli K12 (see paper)
    21% identity, 97% coverage of query (48.9 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory