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Searching for up to 100 curated homologs for GFF1129 FitnessBrowser__Marino:GFF1129 (338 a.a.)

Found high-coverage hits (≥70%) to 57 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

A8I4F4 benzoate 4-monooxygenase (EC 1.14.14.92) from Chromohalobacter sp. (see paper)
    54% identity, 100% coverage of query (363 bits)

1krhA / P07771 X-ray structure of benzoate dioxygenase reductase (see paper)
    51% identity, 99% coverage of query (347 bits)

benC / AAC46438.1 BenC from Acinetobacter baylyi (see 8 papers)
    51% identity, 99% coverage of query (347 bits)

cbdC / Q51603 2-halobenzoate 1,2-dioxygenase electron transfer component (EC 1.14.12.13) from Burkholderia cepacia (see paper)
    48% identity, 99% coverage of query (327 bits)

antC / O85675 anthranilate dioxygenase reductase component (EC 1.14.12.1) from Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) (see 2 papers)
ANTDC_ACIAD / O85675 Anthranilate 1,2-dioxygenase electron transfer component; EC 1.18.1.3 from Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) (see paper)
antC / RF|YP_047248.1 anthranilate dioxygenase reductase from Acinetobacter sp. ADP1 (see paper)
    40% identity, 99% coverage of query (278 bits)

PS417_23695 electron transfer component of the anthranilate 1,2-dioxygenase system (EC 1.14.12.1) from Pseudomonas simiae WCS417
    39% identity, 100% coverage of query (269 bits)

PfGW456L13_2738 electron transfer component of the anthranilate 1,2-dioxygenase system (EC 1.14.12.1) from Pseudomonas fluorescens GW456-L13
    40% identity, 99% coverage of query (265 bits)

Q08KD7 propane 2-monooxygenase (subunit 3/4) (EC 1.14.13.227); alkane 1-monooxygenase (subunit 3/4) (EC 1.14.15.3) from Pseudonocardia sp. TY-7 (see paper)
    33% identity, 95% coverage of query (190 bits)

PRMB_RHOJR / Q0SJK8 Propane 2-monooxygenase, reductase component; PrMO; EC 1.18.1.- from Rhodococcus jostii (strain RHA1) (see paper)
    33% identity, 93% coverage of query (187 bits)

mmoC / P22868 soluble methane monooxygenase reductase component (EC 1.14.13.25) from Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) (see 3 papers)
P22868 methane monooxygenase (soluble) (subunit 2/6) (EC 1.14.13.25) from Methylococcus capsulatus (see 5 papers)
    34% identity, 96% coverage of query (186 bits)

MIMB_MYCS2 / A0QTU9 Propane 2-monooxygenase, reductase component; EC 1.18.1.- from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see 2 papers)
    33% identity, 93% coverage of query (186 bits)

mimB / E9RFT0 propane 2-monooxygenase reductase component (EC 1.14.13.227) from Mycolicibacterium goodii (see 7 papers)
MIMB_MYCGD / E9RFT0 Propane 2-monooxygenase, reductase component; EC 1.18.1.- from Mycolicibacterium goodii (Mycobacterium goodii) (see 2 papers)
    33% identity, 93% coverage of query (185 bits)

prmB / Q768T4 propane 2-monooxygenase reductase component (EC 1.14.13.227) from Gordonia sp. (strain TY-5) (see 2 papers)
PRMB_GORST / Q768T4 Propane 2-monooxygenase, reductase component; Prm; EC 1.18.1.- from Gordonia sp. (strain TY-5) (see 2 papers)
Q768T4 propane 2-monooxygenase (subunit 3/4) (EC 1.14.13.227) from Gordonia sp. (see paper)
    32% identity, 93% coverage of query (174 bits)

oxoR / CAA73201.1 2-oxo-1,2-dihydroquinoline 8-monooxygenase, reductase component from Pseudomonas putida (see paper)
    32% identity, 100% coverage of query (172 bits)

bmoC / Q8KQE6 soluble butane monooxygenase reductase component (EC 1.14.13.230) from Thauera butanivorans (see 5 papers)
Q8KQE6 butane monooxygenase (soluble) (subunit 2/5) (EC 1.14.13.230) from Thauera butanivorans (see 4 papers)
    31% identity, 99% coverage of query (158 bits)

cymAb / O33457 NADH-ferredoxin reductase (EC 1.18.1.3) from Pseudomonas putida (see 2 papers)
O33457 p-cymene methyl-monooxygenase (subunit 1/2) (EC 1.14.15.25) from Pseudomonas putida (see 2 papers)
cymAb / AAB62300.1 p-cymene monooxygenase reductase subunit from Pseudomonas putida (see 3 papers)
    30% identity, 96% coverage of query (155 bits)

dntAa / Q5BM20 2,4-dinitrotoluene dioxygenase complex ferredoxin reductase component (EC 1.14.12.24) from Burkholderia sp. DNT (see 3 papers)
    32% identity, 89% coverage of query (149 bits)

Build an alignment

Build an alignment for GFF1129 and 17 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

Q08KE1 propane 2-monooxygenase (subunit 3/4) (EC 1.14.13.227); alkane 1-monooxygenase (subunit 3/4) (EC 1.14.15.3) from Pseudonocardia sp. TY-7 (see paper)
    28% identity, 94% coverage of query (148 bits)

isoF / Q9RBN7 alkene monooxygenase reductase subunit (EC 1.14.13.69) from Rhodococcus sp. (strain AD45) (see 4 papers)
    31% identity, 99% coverage of query (147 bits)

P95561 nitroarene dioxygenase (subunit 4/4) (EC 1.14.12.23) from Comamonas sp. (see paper)
    32% identity, 89% coverage of query (146 bits)

M9PTH9 nitroarene dioxygenase (subunit 4/4) (EC 1.14.12.23) from Diaphorobacter sp. DS2 (see paper)
    32% identity, 89% coverage of query (146 bits)

NAGAA_RALSP / O52378 Naphthalene 1,2-dioxygenase/salicylate 5-hydroxylase systems, ferredoxin--NAD(P)(+), reductase component; NDO/S5H systems, ferredoxin--NAD(P)(+), reductase component; Ferredoxin reductase NagAa; Ferredoxin--NAD(P)(+) reductase (naphthalene dioxygenase/salicylate 5-hydroxylase ferredoxin-specific); EC 1.18.1.7 from Ralstonia sp. (see 2 papers)
O52378 ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific) (EC 1.18.1.7) from Ralstonia sp. (see paper)
    32% identity, 89% coverage of query (145 bits)

xylA / P21394 NADH-ferredoxin reductase (EC 1.18.1.3) from Pseudomonas putida (see 3 papers)
XYLA_PSEPU / P21394 Xylene/toluene monooxygenase electron transfer component XylA; EC 1.18.1.3 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see paper)
P21394 ferredoxin-NAD+ reductase (EC 1.18.1.3) from Pseudomonas putida (see 2 papers)
    31% identity, 93% coverage of query (145 bits)

ntnA / O52644 NADH-ferredoxin reductase (EC 1.18.1.3) from Pseudomonas sp. TW3 (see paper)
    31% identity, 93% coverage of query (144 bits)

mmoC / Q53563 soluble methane monooxygenase reductase component (EC 1.14.13.25) from Methylosinus trichosporium (see 2 papers)
Q53563 methane monooxygenase (soluble) (subunit 2/6) (EC 1.14.13.25) from Methylosinus trichosporium OB3b (see 2 papers)
    29% identity, 87% coverage of query (140 bits)

P95461 p-cymene methyl-monooxygenase (EC 1.14.15.25) from Pseudomonas chlororaphis subsp. aureofaciens (see paper)
    29% identity, 96% coverage of query (139 bits)

dsoF / O32433 DMSO monooxygenase reductase component (EC 1.14.13.245) from Acinetobacter sp. (see 4 papers)
O32433 assimilatory dimethylsulfide S-monooxygenase (subunit 1/6) (EC 1.14.13.245) from Acinetobacter sp. (see 2 papers)
    31% identity, 93% coverage of query (137 bits)

ndoR / Q52126 naphthalene 1,2-dioxygenase complex ferredoxin reductase component (EC 1.14.12.12) from Pseudomonas putida (see paper)
NDOR_PSEPU / Q52126 Naphthalene 1,2-dioxygenase system ferredoxin--NAD(P)(+), reductase component; Ferredoxin--NAD(P)(+) reductase (naphthalene dioxygenase ferredoxin-specific); EC 1.18.1.7 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 3 papers)
Q52126 ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific) (EC 1.18.1.7) from Pseudomonas putida (see 2 papers)
nahAa / AAA25904.1 naphthalene 1,2-dioxygenase reductase component from Pseudomonas putida (see 3 papers)
    29% identity, 95% coverage of query (135 bits)

nahAa / BAE92154.1 reductase component NahAa of naphthalene dioxygenase from Pseudomonas putida (see 2 papers)
nahAa / AAA25900.1 reductase from Pseudomonas putida (see paper)
    29% identity, 95% coverage of query (134 bits)

tomA5 / Q9ANX0 toluene ortho-monooxygenase TomA5 subunit (EC 1.14.13.243) from Burkholderia cepacia (see paper)
Q9ANX0 toluene 2-monooxygenase (subunit 5/6) (EC 1.14.13.243) from Burkholderia cepacia (see 8 papers)
    28% identity, 93% coverage of query (128 bits)

DNTAA_BURSR / Q45692 2,4-dinitrotoluene dioxygenase system ferredoxin--NAD(+), reductase component; Ferredoxin--NAD(+) reductase (2,4-dinitrotoluene dioxygenase ferredoxin-specific); EC 1.18.1.3 from Burkholderia sp. (strain RASC) (see paper)
    32% identity, 76% coverage of query (128 bits)

5ogxA / A0A076MZ01 Crystal structure of amycolatopsis cytochrome p450 reductase gcob. (see paper)
    28% identity, 95% coverage of query (127 bits)

GCOB_AMYS7 / P0DPQ8 Aromatic O-demethylase, reductase subunit; NADH--hemoprotein reductase; EC 1.6.2.- from Amycolatopsis sp. (strain ATCC 39116 / 75iv2) (see paper)
    28% identity, 95% coverage of query (127 bits)

dmpP / P19734 phenol hydroxylase reductase component (EC 1.14.13.244) from Pseudomonas sp. (strain CF600) (see 9 papers)
DMPP_PSEUF / P19734 Phenol 2-monooxygenase, reductase component DmpP; Phenol 2-monooxygenase P5 component; Phenol hydroxylase P5 protein; EC 1.14.13.244 from Pseudomonas sp. (strain CF600) (see 2 papers)
P19734 phenol 2-monooxygenase (NADH) (subunit 5/6) (EC 1.14.13.244) from Pseudomonas sp. CF600 (see paper)
dmpP phenol hydroxylase P5 protein; EC 1.14.13.7 from Pseudomonas sp. CF600 (see 2 papers)
dmpP / AAA25944.1 phenol hydroxylase from Pseudomonas putida (see paper)
    29% identity, 93% coverage of query (126 bits)

Q84AQ0 phenol 2-monooxygenase (NADH) (subunit 1/5) (EC 1.14.13.244) from Pseudomonas stutzeri (see paper)
    29% identity, 93% coverage of query (126 bits)

tbuC / Q6QHB9 toluene 3-monooxygenase NADH-ferredoxin oxidoreductase subunit (EC 1.14.13.236) from Ralstonia pickettii (see paper)
    28% identity, 96% coverage of query (125 bits)

phlF / CAA56745.1 subunit of phenolhydroxylase from Pseudomonas putida (see 2 papers)
    29% identity, 93% coverage of query (122 bits)

Q52574 toluene 2-monooxygenase (subunit 1/6) (EC 1.14.13.243) from Pseudomonas sp. (see paper)
tbmF / AAA88461.1 oxidoreductase from Pseudomonas sp (see paper)
    26% identity, 96% coverage of query (121 bits)

DMPP_ACICP / Q7WTJ2 Phenol hydroxylase P5 protein; Phenol 2-monooxygenase P5 component; EC 1.14.13.7 from Acinetobacter calcoaceticus (strain PHEA-2)
TC 5.B.1.3.2 / Q7WTJ2 Phenol hydroxylase from Acinetobacter calcoaceticus (strain PHEA-2)
    27% identity, 93% coverage of query (120 bits)

4wqmA / Q03304 Structure of the toluene 4-monooxygenase nadh oxidoreductase t4mof, k270s k271s variant (see paper)
    29% identity, 96% coverage of query (118 bits)

tmoF / Q03304 toluene-4-monooxygenase complex ferredoxin oxidoreductase component (EC 1.14.13.236; EC 1.14.13.244) from Pseudomonas mendocina (see 3 papers)
TMOF_PSEME / Q03304 Toluene-4-monooxygenase system, ferredoxin--NAD(+) reductase component; T4MO; Ferredoxin--NAD(+) reductase; Toluene-4-monooxygenase systme, electron transfer component; EC 1.18.1.3 from Pseudomonas mendocina (see 3 papers)
Q03304 toluene 4-monooxygenase (EC 1.14.13.236) from Pseudomonas mendocina (see 2 papers)
    29% identity, 96% coverage of query (116 bits)

XAMOF_XANP2 / A7IPX7 Alkene monooxygenase system, ferredoxin--NAD(+) reductase component; Alkene monooxygenase 35.5 kDa subunit; Alkene monooxygenase system, electron transfer component; Ferredoxin--NAD(+) reductase; EC 1.18.1.3 from Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) (see 3 papers)
    26% identity, 98% coverage of query (115 bits)

CARAD_PSERE / Q8GI14 Ferredoxin--NAD(P)(+) reductase CarAd; Carbazole 1,9a-dioxygenase, ferredoxin reductase component; CARDO; EC 1.18.1.2; EC 1.18.1.3 from Pseudomonas resinovorans (see 2 papers)
Q8GI14 carbazole 1,9a-dioxygenase (EC 1.14.12.22) from Pseudomonas resinovorans (see paper)
carAd / BAC41551.1 ferredoxin reductase component of carbazole from Pseudomonas resinovorans (see 9 papers)
    28% identity, 91% coverage of query (105 bits)

msmD / Q9X406 methanesulfonate monooxygenase reductase component (EC 1.14.13.111) from Methylosulfonomonas methylovora (see 4 papers)
MSMD_METHY / Q9X406 Putative methanesulfonate monooxygenase ferredoxin reductase subunit; Methanesulfonic acid monooxygenase ferredoxin reductase subunit; MSA monooxygenase ferredoxin reductase subunit; MSAMO ferredoxin reductase subunit; EC 1.14.13.111 from Methylosulfonomonas methylovora (see paper)
    27% identity, 93% coverage of query (105 bits)

ascD / Q66DP5 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase (EC 1.17.1.1) from Yersinia pseudotuberculosis serotype I (strain IP32953) (see paper)
TC 5.B.1.3.1 / Q66DP5 CDP-6-deoxy-delta-3,4-glucoseen reductase from Yersinia pseudotuberculosis serotype I (strain IP32953)
CH_006376 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase from Yersinia pseudotuberculosis (see paper)
    26% identity, 95% coverage of query (103 bits)

A0A0D3QM80 toluene 4-monooxygenase (subunit 1/6) (EC 1.14.13.236) from Pseudomonas sp. M4 (see paper)
    26% identity, 99% coverage of query (102 bits)

7c3aA Ferredoxin reductase in carbazole 1,9a-dioxygenase
    29% identity, 91% coverage of query (100 bits)

Q84II0 carbazole 1,9a-dioxygenase (EC 1.14.12.22) from Janthinobacterium sp. J3 (see paper)
    28% identity, 91% coverage of query (99.8 bits)

7c3bC / Q84II0 Ferredoxin reductase in carbazole 1,9a-dioxygenase (fad apo form) (see paper)
    28% identity, 91% coverage of query (99.8 bits)

TPDR1_COMSP / Q3C1E0 Terephthalate 1,2-dioxygenase, reductase component 1; TPADO reductase component; TER dioxygenase system; TERDOS; EC 1.14.12.15 from Comamonas sp. (see 2 papers)
    24% identity, 94% coverage of query (90.1 bits)

TPDR2_COMSP / Q3C1D2 Terephthalate 1,2-dioxygenase, reductase component 2; TER dioxygenase system; TERDOS; TPADO reductase component; EC 1.14.12.15 from Comamonas sp. (see 2 papers)
tphA1II / BAE47088.1 reductase component of terephthalate 1,2-dioxygenase from Comamonas sp. E6 (see paper)
    24% identity, 93% coverage of query (89.7 bits)

7c3bB / Q84II0 Ferredoxin reductase in carbazole 1,9a-dioxygenase (fad apo form) (see paper)
    27% identity, 91% coverage of query (85.9 bits)

nqrF / Q9X4Q8 Na(+)-translocating NADH-quinone reductase subunit F (EC 7.2.1.1) from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (see 2 papers)
NQRF_VIBC3 / A5F5Y4 Na(+)-translocating NADH-quinone reductase subunit F; Na(+)-NQR subunit F; Na(+)-translocating NQR subunit F; NQR complex subunit F; NQR-1 subunit F; EC 7.2.1.1 from Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) (see 3 papers)
A5F5Y4 NADH:ubiquinone reductase (Na+-transporting) (subunit 1/6) (EC 7.2.1.1) from Vibrio cholerae serotype O1 (see 7 papers)
8a1yF / A5F5Y4 Sodium pumping nadh-quinone oxidoreductase with inhibitor hqno (see paper)
    20% identity, 80% coverage of query (62.0 bits)

8a1uF Sodium pumping nadh-quinone oxidoreductase with substrates nadh and q2
    20% identity, 80% coverage of query (62.0 bits)

NB5R1_ARATH / Q9ZNT1 NADH--cytochrome b5 reductase 1; EC 1.6.2.2 from Arabidopsis thaliana (Mouse-ear cress) (see 4 papers)
    25% identity, 70% coverage of query (59.7 bits)

NIA1_MAIZE / P17571 Nitrate reductase [NADH] 1; NR; EC 1.7.1.1 from Zea mays (Maize) (see 3 papers)
    28% identity, 75% coverage of query (56.2 bits)

Hmp / b2552 nitric oxide dioxygenase (EC 1.14.12.17; EC 1.5.1.34) from Escherichia coli K-12 substr. MG1655 (see 60 papers)
hmp / P24232 nitric oxide dioxygenase (EC 1.14.12.17; EC 1.5.1.34) from Escherichia coli (strain K12) (see 60 papers)
HMP_ECOLI / P24232 Flavohemoprotein; Flavohemoglobin; HMP; Hemoglobin-like protein; Nitric oxide dioxygenase; NO oxygenase; NOD; EC 1.14.12.17 from Escherichia coli (strain K12) (see 6 papers)
1gvhA / P24232 The x-ray structure of ferric escherichia coli flavohemoglobin reveals an unespected geometry of the distal heme pocket (see paper)
hmp / GB|AAC75605.1 flavohemoprotein; EC 1.14.12.17 from Escherichia coli K12 (see 37 papers)
    21% identity, 72% coverage of query (53.9 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory